RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 CLDN16Q9Y5I7 305 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 MED13LQ71F56 2210 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 GTF3C1Q12789 2109 aa12.94□□□□□ -0.34
SPTLC2-202ENST00000554365 IGKV3D-11A0A0A0MRZ8 115 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 TGFBR3LH3BV60 316 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 ITGA10O75578 1167 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 COX7A2P14406 83 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 IGFBP2P18065 325 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 BUD31P41223 144 aaPredicted RBP12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 ALDH9A1P49189 494 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 DUSP2Q05923 314 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 PMPCAQ10713 525 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 SPRED3Q2MJR0 410 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 VPS26BQ4G0F5 336 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 TIGD2Q4W5G0 525 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 OR4F3Q6IEY1 312 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 FAM180BQ6P0A1 224 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 R3HCC1LQ7Z5L2 792 aaKnown RBP12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 RETREG3Q86VR2 466 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 CCDC71Q8IV32 467 aaPredicted RBP12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 ARMC10Q8N2F6 343 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 ZFP62Q8NB50 900 aaPredicted RBP12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 APCDD1LQ8NCL9 501 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 B3GNT7Q8NFL0 401 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 RP9Q8TA86 221 aaKnown RBP12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 TSPEARQ8WU66 669 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 ANKRD9Q96BM1 317 aaPredicted RBP12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 PPCDCQ96CD2 204 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 SPDL1Q96EA4 605 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 ZNF681Q96N22 645 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 ZBTB18Q99592 522 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 ZNF559Q9BR84 538 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 RPF2Q9H7B2 306 aaKnown RBP12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 PNO1Q9NRX1 252 aaKnown RBP12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 TNFRSF10DQ9UBN6 386 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 ERVK-11Q9UQG0 969 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 NF1P21359 2839 aa12.93□□□□□ -0.34
SPTLC2-202ENST00000554365 LOC100653049A0A140TA62 436 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 A0A1W2PP18 115 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 FGF17O60258 216 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 KRT34O76011 436 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 TOXO94900 526 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 NADKO95544 446 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 IL6P05231 212 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 PGRP06401 933 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 MSX1P28360 303 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 S100A3P33764 101 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 RPL3P39023 403 aaKnown RBP12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 FRKP42685 505 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 SSR4P51571 173 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 NR0B1P51843 470 aaKnown RBP12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 PLGLB1Q02325 96 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 TFF3Q07654 80 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 CYLC2Q14093 348 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 CEBPEQ15744 281 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 DPY19L1Q2PZI1 675 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 ZNF750Q32MQ0 723 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 PGS1Q32NB8 556 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 PAGE3Q5JUK9 113 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 CPTPQ5TA50 214 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 OR52E8Q6IFG1 317 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 SCUBE1Q8IWY4 988 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 DMRTC2Q8IXT2 367 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 OR5M3Q8NGP4 307 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 CIDECQ96AQ7 238 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 EXOSC8Q96B26 276 aaKnown RBP12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 CNRIP1Q96F85 164 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 DUSP26Q9BV47 211 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 BHLHE41Q9C0J9 482 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 TIMMDC1Q9NPL8 285 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 SERHLQ9NQF3 203 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 MIEF1Q9NQG6 463 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 SH3BP4Q9P0V3 963 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 TAGLN3Q9UI15 199 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 UTS2RQ9UKP6 389 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 SPACA6W5XKT8 324 aa12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 NUP214P35658 2090 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-202ENST00000554365 CCDC154A6NI56 674 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 FAM166BA8MTA8 275 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 MYO1GB0I1T2 1018 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 NPIPA2E9PIF3 369 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 NPIPA3F8WFD2 350 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 CFLARO15519 480 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 HOXB9P17482 250 aaPredicted RBP12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 EFNA1P20827 205 aaPredicted RBP12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 TLX1P31314 330 aaPredicted RBP12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 NUP107P57740 925 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 PPIAP62937 165 aaKnown RBP12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 IGLV3-21P80748 117 aaPredicted RBP12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 BNIP1Q12981 228 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 MYBPHQ13203 477 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 MAPRE2Q15555 327 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 EMC4Q5J8M3 183 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 REP15Q6BDI9 236 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 SLC2A7Q6PXP3 512 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 C16orf47Q6ZP98 133 aaPredicted RBP12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 MSANTD1Q6ZTZ1 278 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 OR4N5Q8IXE1 308 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 ZNF595Q8IYB9 648 aa12.91□□□□□ -0.34
SPTLC2-202ENST00000554365 PSD4Q8NDX1 1056 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms