RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 RASSF2P50749 326 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 NCBP2P52298 156 aaKnown RBP eCLIP12□□□□□ -0.49
SHMT2-211ENST00000554310 FBXW4P57775 412 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 RPL38P63173 70 aaKnown RBP12□□□□□ -0.49
SHMT2-211ENST00000554310 PLCXD2Q0VAA5 305 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 KRT72Q14CN4 511 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 NNATQ16517 81 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 XKR7Q5GH72 579 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 TMEM64Q6YI46 380 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 Q6ZSR9 355 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 DDIASQ8IXT1 998 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 ZNF808Q8N4W9 903 aaPredicted RBP12□□□□□ -0.49
SHMT2-211ENST00000554310 SIMC1Q8NDZ2 872 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 OR5M3Q8NGP4 307 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 SPPL2AQ8TCT8 520 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 PHF10Q8WUB8 498 aaKnown RBP12□□□□□ -0.49
SHMT2-211ENST00000554310 ZNF597Q96LX8 424 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 BTBD9Q96Q07 612 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 SORT1Q99523 831 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 DOHHQ9BU89 302 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 DEFB127Q9H1M4 99 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 LRMDAQ9H2I8 198 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 ZNF395Q9H8N7 513 aaPredicted RBP12□□□□□ -0.49
SHMT2-211ENST00000554310 ZFP64Q9NPA5 681 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 QPCTLQ9NXS2 382 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 MEMO1Q9Y316 297 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 CACNA1CQ13936 2221 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 NBPF19A0A087WUL8 3843 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 OR14I1A6ND48 311 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 E9PLN8 166 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 PIP5K1BO14986 540 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 CCDC22O60826 627 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 SNUPNO95149 360 aaKnown RBP11.99□□□□□ -0.49
SHMT2-211ENST00000554310 SNX4O95219 450 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 TPOP07202 933 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 ABCB1P08183 1280 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-211ENST00000554310 IFI6P09912 130 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 T-ENOLP0DO92 83 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 SDC1P18827 310 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 TACR1P25103 407 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 ARRB2P32121 409 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 MAGEA5P43359 124 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 ASMTP46597 345 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 SMSP52788 366 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 AQP5P55064 265 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 UGT3A2Q3SY77 523 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 TMEM81Q6P7N7 255 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 TRILQ7L0X0 811 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 CD163Q86VB7 1156 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 DOLPP1Q86YN1 238 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 PRR22Q8IZ63 422 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 SLC34A3Q8N130 599 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 OR7G2Q8NG99 324 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 AGR3Q8TD06 166 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 ITLN2Q8WWU7 325 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-211ENST00000554310 STON2Q8WXE9 905 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 KAT2AQ92830 837 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 OMA1Q96E52 524 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 PPP3R2Q96LZ3 170 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 VSTM2LQ96N03 204 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 VKORC1Q9BQB6 163 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 PROK2Q9HC23 129 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 TAS2R9Q9NYW1 312 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 EXO1Q9UQ84 846 aaKnown RBP11.99□□□□□ -0.49
SHMT2-211ENST00000554310 GPR55Q9Y2T6 319 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-211ENST00000554310 NINQ8N4C6 2090 aa11.99□□□□□ -0.49
SHMT2-211ENST00000554310 A0A087WV62 115 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 A0A1B0GVC2 190 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 ATP6AP2A0A1C7CYW4 349 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 AQP7O14520 342 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 BCKDKO14874 412 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 PDPK1O15530 556 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 HCN1O60741 890 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 TBX19O60806 448 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 ABCB7O75027 752 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 TRIM3O75382 744 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-211ENST00000554310 ERN1O75460 977 aaKnown RBP11.98□□□□□ -0.49
SHMT2-211ENST00000554310 LYPLA1O75608 230 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-211ENST00000554310 ATP6AP2O75787 350 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 PDE9AO76083 593 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 HSPA4LO95757 839 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 JUNP05412 331 aaKnown RBP11.98□□□□□ -0.49
SHMT2-211ENST00000554310 DDX5P17844 614 aaKnown RBP11.98□□□□□ -0.49
SHMT2-211ENST00000554310 AGAP20933 346 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 MAPK1P28482 360 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 MC3RP41968 323 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 ADORA2A-AS1P86434 159 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 PDE7AQ13946 482 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 ATP6AP1LQ52LC2 224 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 RFTN2Q52LD8 501 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-211ENST00000554310 FBXW10Q5XX13 1052 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 TMEM198Q66K66 360 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 NUP54Q7Z3B4 507 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 MRGPRGQ86SM5 289 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 HGDQ93099 445 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 NSL1Q96IY1 281 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 EGLN2Q96KS0 407 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 RILPQ96NA2 401 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 AMDHD1Q96NU7 426 aa11.98□□□□□ -0.49
SHMT2-211ENST00000554310 RAB3IPQ96QF0 476 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms