RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 OR52I1Q8NGK6 324 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 SVIPQ8NHG7 77 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 TCTEX1D2Q8WW35 142 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 ACOT12Q8WYK0 555 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 ESAMQ96AP7 390 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 PAWRQ96IZ0 340 aaKnown RBP9.02□□□□□ -0.97
SIX4-202ENST00000554079 COLEC11Q9BWP8 271 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 TEX10Q9NXF1 929 aaPredicted RBP9.02□□□□□ -0.97
SIX4-202ENST00000554079 CBLCQ9ULV8 474 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 RPL36Q9Y3U8 105 aaKnown RBP9.02□□□□□ -0.97
SIX4-202ENST00000554079 KCTD3Q9Y597 815 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 NME7Q9Y5B8 376 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 DSPPQ9NZW4 1301 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 CCDC88CQ9P219 2028 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 NPEPPSL1A6NEC2 478 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 NCF1BA6NI72 391 aaPredicted RBP9.01□□□□□ -0.97
SIX4-202ENST00000554079 NCF1CA8MVU1 366 aaPredicted RBP9.01□□□□□ -0.97
SIX4-202ENST00000554079 C5orf58C9J3I9 102 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 NEDD8-MDP1E9PL57 170 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 TLR4O00206 839 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 CCL22O00626 93 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 KIAA0355O15063 1070 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 ULK1O75385 1050 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 KRT33AO76009 404 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 RAB36O95755 333 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 MT-ND4P03905 459 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 WNT1P04628 370 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 RB1P06400 928 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 C1SP09871 688 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 ANKRD34CP0C6C1 535 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 ZNF865P0CJ78 1059 aaPredicted RBP9.01□□□□□ -0.97
SIX4-202ENST00000554079 HSD3B1P14060 373 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 CPN1P15169 458 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 ANXA7P20073 488 aaKnown RBP9.01□□□□□ -0.97
SIX4-202ENST00000554079 AGAP20933 346 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 MAPK3P27361 379 aaPredicted RBP9.01□□□□□ -0.97
SIX4-202ENST00000554079 ABCD3P28288 659 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 NOS3P29474 1203 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 GKP32189 559 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 ASMTP46597 345 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 CDH12P55289 794 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 WNT4P56705 351 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 C21orf58P58505 322 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 TPI1P60174 286 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 SPIBQ01892 262 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 TLE2Q04725 743 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 SKP2Q13309 424 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 PEA15Q15121 130 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 ARSIQ5FYB1 569 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 GPRC6AQ5T6X5 926 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 AFMIDQ63HM1 303 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 CDPF1Q6NVV7 123 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 LHFPL3Q86UP9 236 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 ANKRD46Q86W74 232 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 STK40Q8N2I9 435 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 NLGN1Q8N2Q7 840 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 CPXM2Q8N436 756 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 TOMM5Q8N4H5 51 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 TRMT10AQ8TBZ6 339 aaKnown RBP9.01□□□□□ -0.97
SIX4-202ENST00000554079 METTL6Q8TCB7 284 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 HASPINQ8TF76 798 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 SLC39A7Q92504 469 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 WNT2BQ93097 391 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 NT5C3BQ969T7 300 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 NTMT1Q9BV86 223 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 PBX4Q9BYU1 374 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 SLC38A1Q9H2H9 487 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 PRDM13Q9H4Q3 707 aa9.01□□□□□ -0.97
SIX4-202ENST00000554079 AFF4Q9UHB7 1163 aaKnown RBP9.01□□□□□ -0.97
SIX4-202ENST00000554079 SYNJ2BP-COX16A0A087WUM0 186 aa9□□□□□ -0.97
SIX4-202ENST00000554079 METTL21EPA6NDL7 271 aa9□□□□□ -0.97
SIX4-202ENST00000554079 URADA6NGE7 173 aa9□□□□□ -0.97
SIX4-202ENST00000554079 TMEM189-UBE2V1I3L0A0 370 aa9□□□□□ -0.97
SIX4-202ENST00000554079 MID1O15344 667 aa9□□□□□ -0.97
SIX4-202ENST00000554079 SMAD6O43541 496 aaKnown RBP9□□□□□ -0.97
SIX4-202ENST00000554079 F12P00748 615 aaPredicted RBP9□□□□□ -0.97
SIX4-202ENST00000554079 UBBP0CG47 229 aa9□□□□□ -0.97
SIX4-202ENST00000554079 UBCP0CG48 685 aaKnown RBP9□□□□□ -0.97
SIX4-202ENST00000554079 CXCL8P10145 99 aa9□□□□□ -0.97
SIX4-202ENST00000554079 ABOP16442 354 aa9□□□□□ -0.97
SIX4-202ENST00000554079 RCC1P18754 421 aaPredicted RBP9□□□□□ -0.97
SIX4-202ENST00000554079 DRD5P21918 477 aa9□□□□□ -0.97
SIX4-202ENST00000554079 LIMS1P48059 325 aa9□□□□□ -0.97
SIX4-202ENST00000554079 PPT1P50897 306 aa9□□□□□ -0.97
SIX4-202ENST00000554079 MVDP53602 400 aa9□□□□□ -0.97
SIX4-202ENST00000554079 CDH4P55283 916 aa9□□□□□ -0.97
SIX4-202ENST00000554079 RPS27AP62979 156 aaKnown RBP9□□□□□ -0.97
SIX4-202ENST00000554079 UBA52P62987 128 aaKnown RBP9□□□□□ -0.97
SIX4-202ENST00000554079 KLF9Q13886 244 aaPredicted RBP9□□□□□ -0.97
SIX4-202ENST00000554079 LBHQ53QV2 105 aaPredicted RBP9□□□□□ -0.97
SIX4-202ENST00000554079 MARCH8Q5T0T0 291 aa9□□□□□ -0.97
SIX4-202ENST00000554079 C12orf73Q69YU5 71 aa9□□□□□ -0.97
SIX4-202ENST00000554079 UNQ6494/PRO21346Q6UXR6 183 aa9□□□□□ -0.97
SIX4-202ENST00000554079 NHLRC1Q6VVB1 395 aa9□□□□□ -0.97
SIX4-202ENST00000554079 B3GLCTQ6Y288 498 aa9□□□□□ -0.97
SIX4-202ENST00000554079 PRICKLE2Q7Z3G6 844 aa9□□□□□ -0.97
SIX4-202ENST00000554079 DPPA2Q7Z7J5 298 aa9□□□□□ -0.97
SIX4-202ENST00000554079 NR2C2APQ86WQ0 139 aa9□□□□□ -0.97
SIX4-202ENST00000554079 MARCH9Q86YJ5 346 aa9□□□□□ -0.97
SIX4-202ENST00000554079 TMEM192Q8IY95 271 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms