RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 TBCCQ15814 346 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 SGCBQ16585 318 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 PDK4Q16654 411 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 C6orf163Q5TEZ5 329 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 RAD9BQ6WBX8 426 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 GALNT7Q86SF2 657 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 ADAMTSL2Q86TH1 951 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 STK32CQ86UX6 486 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 GPSM1Q86YR5 675 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 TCAIMQ8N3R3 496 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 ZNF525Q8N782 197 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 PPM1NQ8N819 430 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 FAM168AQ92567 244 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 GFM2Q969S9 779 aaKnown RBP12.34□□□□□ -0.43
PRPF39-204ENST00000553605 UBE2E3Q969T4 207 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 ESAMQ96AP7 390 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 PRRG4Q9BZD6 226 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 CNOT10Q9H9A5 744 aaKnown RBP12.34□□□□□ -0.43
PRPF39-204ENST00000553605 WDR41Q9HAD4 459 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 EML4Q9HC35 981 aaKnown RBP12.34□□□□□ -0.43
PRPF39-204ENST00000553605 SLC17A6Q9P2U8 582 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 CLEC4AQ9UMR7 237 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 CFL2Q9Y281 166 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 CAPN6Q9Y6Q1 641 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 B4DXG7 233 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 PGRMC2O15173 223 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 STK16O75716 305 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 PGAM1P18669 254 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 S1PR1P21453 382 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 NT5EP21589 574 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 PIK3R1P27986 724 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 HSPA7P48741 367 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 CLDN20P56880 219 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 BSPH1Q075Z2 132 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 AGAP6Q5VW22 663 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 RAET1LQ5VY80 246 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 MRM1Q6IN84 353 aaKnown RBP12.33□□□□□ -0.44
PRPF39-204ENST00000553605 MED27Q6P2C8 311 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 ATG4DQ86TL0 474 aaPredicted RBP12.33□□□□□ -0.44
PRPF39-204ENST00000553605 LAS2Q8IYD9 372 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 RNF175Q8N4F7 328 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 GBP7Q8N8V2 638 aaPredicted RBP12.33□□□□□ -0.44
PRPF39-204ENST00000553605 ADCY4Q8NFM4 1077 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 OR7G3Q8NG95 312 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 OR4K17Q8NGC6 315 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 GMPPAQ96IJ6 420 aaPredicted RBP12.33□□□□□ -0.44
PRPF39-204ENST00000553605 COL21A1Q96P44 957 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 CENPKQ9BS16 269 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 CACNG6Q9BXT2 260 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 HDHD5Q9BXW7 423 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 ITPAQ9BY32 194 aa12.33□□□□□ -0.44
PRPF39-204ENST00000553605 LYARQ9NX58 379 aaKnown RBP12.33□□□□□ -0.44
PRPF39-204ENST00000553605 PKD1L1Q8TDX9 2849 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 DPRXA6NFQ7 191 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 OR6C70A6NIJ9 312 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 H3BML4 177 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 TMPRSS11DO60235 418 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 SS18L1O75177 396 aaPredicted RBP12.32□□□□□ -0.44
PRPF39-204ENST00000553605 FAM58BPP0C7Q3 252 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 EPORP19235 508 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 HK1P19367 917 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 GRK2P25098 689 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 ADH6P28332 368 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 SERPINB1P30740 379 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 C21orf58P58505 322 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 ZNF460Q14592 562 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 RAB35Q15286 201 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 TAB1Q15750 504 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 TEDDM1Q5T9Z0 273 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 PPP4R4Q6NUP7 873 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 CYP20A1Q6UW02 462 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 METTL25Q8N6Q8 603 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 C3orf56Q8N813 242 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 C10orf105Q8TEF2 133 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 ANKRD49Q8WVL7 239 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 HSD17B8Q92506 261 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 HTRA1Q92743 480 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 MSI2Q96DH6 328 aaKnown RBP12.32□□□□□ -0.44
PRPF39-204ENST00000553605 FOLH1BQ9HBA9 442 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 PPANQ9NQ55 473 aaKnown RBP12.32□□□□□ -0.44
PRPF39-204ENST00000553605 BCAP29Q9UHQ4 241 aa12.32□□□□□ -0.44
PRPF39-204ENST00000553605 A0A0A6YYD5 115 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 A0A0G2JK05 382 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 LINC01387J3KSC0 135 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 RAMP1O60894 148 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 EEDO75530 441 aaKnown RBP12.31□□□□□ -0.44
PRPF39-204ENST00000553605 REM1O75628 298 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 KRT14P02533 472 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 DRD5P21918 477 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 SLC6A8P48029 635 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 XKP51811 444 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 ARFIP1P53367 373 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 DDX39BQ13838 428 aaKnown RBP12.31□□□□□ -0.44
PRPF39-204ENST00000553605 E2F2Q14209 437 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 TSC22D1Q15714 1073 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 SPANXN3Q5MJ09 141 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 OR52E8Q6IFG1 317 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 FIGNL1Q6PIW4 674 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 ZNF619Q8N2I2 560 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 OR4K14Q8NGD5 310 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms