RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CHRM5P08912 532 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-205ENST00000553474 SLC35G6P0C7Q6 338 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 ACP2P11117 423 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 MYL12AP19105 171 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 ZNF10P21506 573 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-205ENST00000553474 PEBP1P30086 187 aaKnown RBP12.12□□□□□ -0.47
SHMT2-205ENST00000553474 FEN1P39748 380 aaKnown RBP12.12□□□□□ -0.47
SHMT2-205ENST00000553474 WASP42768 502 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 RORCP51449 518 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 TAS2R41P59536 307 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 TJAP1Q5JTD0 557 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 STEAP3Q658P3 488 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 HEPHL1Q6MZM0 1159 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 TMEM107Q6UX40 140 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 SLC36A4Q6YBV0 504 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 RRM2BQ7LG56 351 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 CACUL1Q86Y37 369 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 CADM3Q8N126 398 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 SETD6Q8TBK2 473 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 TMEM163Q8TC26 289 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 LCN9Q8WX39 176 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 UCN3Q969E3 161 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 OTUB1Q96FW1 271 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-205ENST00000553474 SLC6A18Q96N87 628 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 WDFY2Q96P53 400 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 MS4A4EQ96PG1 132 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 CACYBPQ9HB71 228 aaKnown RBP12.12□□□□□ -0.47
SHMT2-205ENST00000553474 FGF20Q9NP95 211 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-205ENST00000553474 KRCC1Q9NPI7 259 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-205ENST00000553474 PRDM8Q9NQV8 689 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 ABCB10Q9NRK6 738 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 TAS2R16Q9NYV7 291 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 SCHIP1Q9P0W5 487 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-205ENST00000553474 MOSPD1Q9UJG1 213 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 FBXW2Q9UKT8 454 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 PCDHGB6Q9Y5F9 930 aa12.12□□□□□ -0.47
SHMT2-205ENST00000553474 IQCMA0A1B0GVH7 501 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 SLC35F4A4IF30 521 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 ISM1B1AKI9 464 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 C4orf51C9J302 202 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 LATO43561 262 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 TLX2O43763 284 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-205ENST00000553474 PRKYO43930 277 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 TPST2O60704 377 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 GPX5O75715 221 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 IL1AP01583 271 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 CPEP16870 476 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 CERS1P27544 350 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 RUNX1T1Q06455 604 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 CBX3Q13185 183 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 DNASE1L3Q13609 305 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 SUZ12Q15022 739 aaKnown RBP12.11□□□□□ -0.47
SHMT2-205ENST00000553474 DECR1Q16698 335 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 MINDY4Q4G0A6 757 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 C16orf62Q7Z3J2 963 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 LRRC25Q8N386 305 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-205ENST00000553474 SLC44A3Q8N4M1 653 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 CHAC2Q8WUX2 184 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 ZFPM2Q8WW38 1151 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 PMM1Q92871 262 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 OSTF1Q92882 214 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 RFKQ969G6 155 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 LRR1Q96L50 414 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 CEP19Q96LK0 163 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 ZNF582Q96NG8 517 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-205ENST00000553474 SERINC2Q96SA4 455 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 WFDC6Q9BQY6 131 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 SLC30A2Q9BRI3 323 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 ASPNQ9BXN1 380 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 MKRN2Q9H000 416 aaKnown RBP12.11□□□□□ -0.47
SHMT2-205ENST00000553474 ARMC7Q9H6L4 198 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 EVA1AQ9H8M9 152 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 MTHFD2LQ9H903 347 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-205ENST00000553474 PTGFRNQ9P2B2 879 aa12.11□□□□□ -0.47
SHMT2-205ENST00000553474 APOBEC3BQ9UH17 382 aaKnown RBP12.11□□□□□ -0.47
SHMT2-205ENST00000553474 EXOSC1Q9Y3B2 195 aaKnown RBP12.11□□□□□ -0.47
SHMT2-205ENST00000553474 GOLGA4Q13439 2230 aaKnown RBP12.11□□□□□ -0.47
SHMT2-205ENST00000553474 A0A087WUU8 490 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TBC1D3DA0A087WVF3 549 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TBC1D3IA0A087WXS9 549 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TBC1D3EA0A087X179 549 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 GLOD5A6NK44 160 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TBC1D3LB9A6J9 549 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 AP3D1O14617 1153 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TNFRSF10CO14798 259 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TBX1O43435 398 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TNFSF14O43557 240 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 OR5F1O95221 314 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 APOA1P02647 267 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 EIF2S1P05198 315 aaKnown RBP12.1□□□□□ -0.47
SHMT2-205ENST00000553474 ADRA2AP08913 450 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 HBQ1P09105 142 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TBC1D3HP0C7X1 549 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TLX1P31314 330 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-205ENST00000553474 MC3RP41968 323 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 STAT5AP42229 794 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 CRYBB2P43320 205 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 SOX9P48436 509 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 WNT4P56705 351 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TNFRSF17Q02223 184 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms