RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 LSM1O15116 133 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 CTIFO43310 598 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 ICOSLGO75144 302 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 UGT2B11O75310 529 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 CBR3O75828 277 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 CHRNGP07510 517 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 BPGMP07738 259 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 LINC00032P0C843 101 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 MAPK1P28482 360 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 IL12BP29460 328 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 GCKP35557 465 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 ZNHIT3Q15649 155 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 UGT3A2Q3SY77 523 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 CYP27C1Q4G0S4 372 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 RFTN2Q52LD8 501 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 NHSL2Q5HYW2 709 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 BICRALQ6AI39 1079 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 LRIG3Q6UXM1 1119 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 NCCRP1Q6ZVX7 275 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 R3HCC1LQ7Z5L2 792 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 PM20D2Q8IYS1 436 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 OR2L13Q8N349 312 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 TWIST2Q8WVJ9 160 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 ELP4Q96EB1 424 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 EGLN2Q96KS0 407 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 PPP3R2Q96LZ3 170 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 NODALQ96S42 347 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 SPOCK3Q9BQ16 436 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 TTYH2Q9BSA4 534 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 MECRQ9BV79 373 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 TUBB1Q9H4B7 451 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 GLIPR2Q9H4G4 154 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 REEP4Q9H6H4 257 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 KCNJ16Q9NPI9 418 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 DDX18Q9NVP1 670 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 MRTO4Q9UKD2 239 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 EXO1Q9UQ84 846 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 RNF6Q9Y252 685 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 OR10H1Q9Y4A9 318 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 CSMD1Q96PZ7 3565 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 NCKAP5O14513 1909 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 C15orf38-AP3S2A0A0A6YYH1 394 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 GNB5O14775 395 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 SNPHO15079 494 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 TSPAN2O60636 221 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 SNUPNO95149 360 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 ENDOUP21128 410 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 TACR1P25103 407 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 PTPN6P29350 595 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 RPL3P39023 403 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 MC3RP41968 323 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 ETV4P43268 484 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 PSMD4P55036 377 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 CORO7P57737 925 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 NUP107P57740 925 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 RPL38P63173 70 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 TOMM20Q15388 145 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 CDSNQ15517 529 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 SH2D4BQ5SQS7 431 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 C1orf185Q5T7R7 199 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 TMEM107Q6UX40 140 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 ANGPTL8Q6UXH0 198 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 LARP4Q71RC2 724 aaKnown RBP eCLIP12.02□□□□□ -0.493e-11■■□□□ 11.8
HNRNPC-205ENST00000553300 NUDCD3Q8IVD9 361 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 SLC44A2Q8IWA5 706 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 MCEMP1Q8IX19 187 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 KIRREL3Q8IZU9 778 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 OR10Q1Q8NGQ4 319 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 OR6Y1Q8NGX8 325 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 OR2T11Q8NH01 316 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 ZFP28Q8NHY6 868 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 PPCDCQ96CD2 204 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 ZBED6CLQ96FA7 236 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 ADOQ96SZ5 270 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 TIMP4Q99727 224 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 SLC6A15Q9H2J7 730 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 ANKRA2Q9H9E1 313 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 C3orf14Q9HBI5 128 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 ALKBH4Q9NXW9 302 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 SPRR3Q9UBC9 169 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 TNFRSF10DQ9UBN6 386 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 FAM215AQ9Y5M1 114 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 PTGDR2Q9Y5Y4 395 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 LRBAP50851 2863 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 APCP25054 2843 aa12.02□□□□□ -0.49
HNRNPC-205ENST00000553300 UPK1AO00322 258 aa12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 PIP5K1BO14986 540 aa12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 TM9SF1O15321 606 aa12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 BIRC5O15392 142 aa12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 PDPK1O15530 556 aa12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 PSMG1O95456 288 aa12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 ACTL6AO96019 429 aa12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 GLI4P10075 376 aa12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 SDC1P18827 310 aa12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 PTGDSP41222 190 aa12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 ZFP36L2P47974 494 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 TRPC1P48995 793 aa12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 PSG6Q00889 435 aa12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 ZNF844Q08AG5 666 aa12.01□□□□□ -0.49
HNRNPC-205ENST00000553300 ZNF155Q12901 538 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms