RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 METTL17Q9H7H0 456 aaPredicted RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 CCDC177Q9NQR7 707 aaPredicted RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 CBLN4Q9NTU7 201 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 CTTNBP2NLQ9P2B4 639 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 CLCF1Q9UBD9 225 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 GRHPRQ9UBQ7 328 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 IKZF3Q9UKT9 509 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 C15orf41Q9Y2V0 281 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 CHCHD2Q9Y6H1 151 aaPredicted RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 ARHGAP21Q5T5U3 1957 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 ANK2Q01484 3957 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 TENM1Q9UKZ4 2725 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 TCRBV5S2A0A599 114 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 H7C0C1 242 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 CDC7O00311 574 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 APOL3O95236 402 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 MPIG6BO95866 241 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 TGM6O95932 706 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 GOT2P00505 430 aaKnown RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF888P0CJ79 500 aaPredicted RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 IL11P20809 199 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 RPS3P23396 243 aaKnown RBP eCLIP4.62□□□□□ -1.675e-16■■□□□ 12.4
CKAP4-203ENST00000553039 HPDP32754 393 aaPredicted RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 AHRP35869 848 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 SERPINF1P36955 418 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 COILP38432 576 aaPredicted RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 NR4A2P43354 598 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 ATP5OP48047 213 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 TMED10P49755 219 aaKnown RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 ARFIP2P53365 341 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 UBASH3AP57075 661 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 HILS1P60008 231 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 RAB8AP61006 207 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 SIRPAP78324 504 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 PRAMEP78395 509 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 BTN3A2P78410 334 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 CCZ1BP86790 482 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 CCZ1P86791 482 aaPredicted RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 EGR3Q06889 387 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 DBPQ10586 325 aaPredicted RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 DOC2BQ14184 412 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 SPARCL1Q14515 664 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 POU6F1Q14863 301 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 NTRK2Q16620 822 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 CYP1B1Q16678 543 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 LRRC38Q5VT99 294 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 VWA1Q6PCB0 445 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 SLC29A4Q7RTT9 530 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 SDCCAG8Q86SQ7 713 aaPredicted RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 CREG2Q8IUH2 290 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 FBXL14Q8N1E6 418 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 CA13Q8N1Q1 262 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF525Q8N782 197 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 LINC01356Q8N9X3 169 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 PPFIBP2Q8ND30 876 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 HIPK4Q8NE63 616 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 FAM83FQ8NEG4 500 aaPredicted RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 SEMA6DQ8NFY4 1073 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 OR10G3Q8NGC4 313 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 OR14L1PQ8NHC6 308 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 NT5CQ8TCD5 201 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 SLC2A12Q8TD20 617 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 HOXB13Q92826 284 aaPredicted RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 C3orf49Q96BT1 292 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 PYCR2Q96C36 320 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 HAUS1Q96CS2 278 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 SENP5Q96HI0 755 aaPredicted RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 MEGF10Q96KG7 1140 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 RILPQ96NA2 401 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 BTBD9Q96Q07 612 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 PKP2Q99959 881 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 HAUS8Q9BT25 410 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 CACNG6Q9BXT2 260 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 ACTR6Q9GZN1 396 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 LRRC40Q9H9A6 602 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 MYOZ1Q9NP98 299 aaPredicted RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 PNPOQ9NVS9 261 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 IFNKQ9P0W0 207 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 UVRAGQ9P2Y5 699 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 LIMA1Q9UHB6 759 aaKnown RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 ZFP69BQ9UJL9 534 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 CNOT11Q9UKZ1 510 aaKnown RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 RIMKLBQ9ULI2 386 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 MRPS18CQ9Y3D5 142 aaKnown RBP4.62□□□□□ -1.67
CKAP4-203ENST00000553039 U3KQE9 123 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 CR1P17927 2039 aa4.62□□□□□ -1.67
CKAP4-203ENST00000553039 LOC390937A0A1W2PQ73 354 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 TRBC2A0A5B9 178 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 KRT87PA6NCN2 255 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 OR51F1A6NGY5 319 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 F5H0A9 414 aaPredicted RBP4.61□□□□□ -1.67
CKAP4-203ENST00000553039 BCL10O95999 233 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 SERPINA6P08185 405 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 H2AFZP0C0S5 128 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 SMIM10L1P0DMW3 83 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 HKR1P10072 659 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 PEPDP12955 493 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 FAHP16930 419 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF23P17027 643 aa4.61□□□□□ -1.67
CKAP4-203ENST00000553039 ADRA1DP25100 572 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms