RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CORO2BQ9UQ03 480 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 EXO1Q9UQ84 846 aaKnown RBP9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 MASP2O00187 686 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 TFECO14948 347 aaPredicted RBP9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 SLC22A2O15244 555 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 ASNA1O43681 348 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 C1QL1O75973 258 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 ANP32DO95626 131 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 NGFRP08138 427 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 GUSBP08236 651 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 HOXD4P09016 255 aaPredicted RBP9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 ZCCHC18P0CG32 403 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 CHI3L1P36222 383 aaPredicted RBP9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 PIGAP37287 484 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 MASP1P48740 699 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 IDH3AP50213 366 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 POLR2JP52435 117 aaKnown RBP9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 PRKAG1P54619 331 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 FOXK1P85037 733 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 EXOSC7Q15024 291 aaKnown RBP9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 LTB4RQ15722 352 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 ZSWIM7Q19AV6 140 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 HYAL4Q2M3T9 481 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 ZNF750Q32MQ0 723 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 FAM174BQ3ZCQ3 159 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 COLEC12Q5KU26 742 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 FHL5Q5TD97 284 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 DGAT2L6Q6ZPD8 337 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 ZNF551Q7Z340 670 aaPredicted RBP9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 MMP21Q8N119 569 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 ZNF321PQ8N8H1 164 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 COX18Q8N8Q8 333 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 Q8NA96 180 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 OR4A15Q8NGL6 344 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 SPPL2AQ8TCT8 520 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 GPR151Q8TDV0 419 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 GRHL3Q8TE85 626 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 HOXB13Q92826 284 aaPredicted RBP9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 MIB2Q96AX9 1013 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 ZBTB9Q96C00 473 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 OMA1Q96E52 524 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 CHMP6Q96FZ7 201 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 SIGLEC12Q96PQ1 595 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 PANX1Q96RD7 426 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 NPAS2Q99743 824 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 BTBD2Q9BX70 525 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 ITPAQ9BY32 194 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 NXF5Q9H1B4 397 aaKnown RBP9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 PIGUQ9H490 435 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 WDR55Q9H6Y2 383 aaPredicted RBP9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 PTGES2Q9H7Z7 377 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 ZFP64Q9NPA5 681 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 SLCO1B3Q9NPD5 702 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 KLHL1Q9NR64 748 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 ANKRD10Q9NXR5 420 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 LIPT1Q9Y234 373 aa9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.46□□□□□ -0.9
TRAFD1-208ENST00000552890 NBASA2RRP1 2371 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 BOD1L1Q8NFC6 3051 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 A0A0G2JND7 137 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 A0A1B0GUH1 482 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 OR14I1A6ND48 311 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 ANKUB1A6NFN9 424 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 FAM47E-STBD1D6RA91 191 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 LINC01387J3KSC0 135 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 HRKO00198 91 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 RFXANKO14593 260 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 ZNF195O14628 629 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 ANKRD28O15084 1053 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 PRKNO60260 465 aaPredicted RBP9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 SUSD5O60279 629 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 HCN1O60741 890 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 CBR3O75828 277 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 NKX2-2O95096 273 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 NADKO95544 446 aaPredicted RBP9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 IL33O95760 270 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 NPPAP01160 153 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 CLPSP04118 112 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 PRB1P04280 392 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 HMGN2P05204 90 aaKnown RBP9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 ABCB1P08183 1280 aaPredicted RBP9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 CT45A8P0DMV1 189 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 CT45A9P0DMV2 189 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 NCF2P19878 526 aaPredicted RBP9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 MSX1P28360 303 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 MEOX1P50221 254 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 HPCAP84074 193 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 KCNC4Q03721 635 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 SLC10A1Q14973 349 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 SLC9B1Q4ZJI4 515 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 CT45A2Q5DJT8 189 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 MFSD12Q6NUT3 480 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 CDC73Q6P1J9 531 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 ARHGAP11AQ6P4F7 1023 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 SULF2Q8IWU5 870 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 SHISA5Q8N114 240 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 FAM109AQ8N4B1 249 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 KRTCAP2Q8N6L1 136 aa9.45□□□□□ -0.9
TRAFD1-208ENST00000552890 OR2M7Q8NG81 312 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms