RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 NAALAD2Q9Y3Q0 740 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 WDR45Q9Y484 360 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 PCDHGA4Q9Y5G9 962 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 SLC9B1P1A6NJY1 282 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 PSMD9O00233 223 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 MAN2B1O00754 1011 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 MYL12BO14950 172 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 KIAA0513O60268 411 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 REM1O75628 298 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 CPNE6O95741 557 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 ADORA3P0DMS8 318 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 PORP16435 677 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-215ENST00000552823 PCSK2P16519 638 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 TRHRP34981 398 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-215ENST00000552823 NKX2-5P52952 324 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-215ENST00000552823 SH3BGRP55822 239 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-215ENST00000552823 RPA4Q13156 261 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 ZNF267Q14586 743 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-215ENST00000552823 KCNAB1Q14722 419 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 MOGQ16653 247 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 RGS21Q2M5E4 152 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 DEFB133Q30KQ1 61 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 ZNF829Q3KNS6 432 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-215ENST00000552823 ZNF658BQ4V348 819 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-215ENST00000552823 FAHD1Q6P587 224 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 MSANTD1Q6ZTZ1 278 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 CYP4Z2PQ8N1L4 340 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 DEPDC4Q8N2C3 294 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 COX18Q8N8Q8 333 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 OR52P1PQ8NH57 321 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 FNDC8Q8TC99 324 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 LMX1AQ8TE12 382 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 SLC37A2Q8TED4 501 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 MRPL38Q96DV4 380 aaKnown RBP5.25□□□□□ -1.57
LIMA1-215ENST00000552823 FCRL1Q96LA6 429 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 RIPOR3Q96MK2 946 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 EPYCQ99645 322 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 DPH1Q9BZG8 443 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 RACGAP1Q9H0H5 632 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 PCBD2Q9H0N5 130 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 PELI2Q9HAT8 420 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 TIGARQ9NQ88 270 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 CHCHD3Q9NX63 227 aaKnown RBP5.25□□□□□ -1.57
LIMA1-215ENST00000552823 SNX7Q9UNH6 387 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 ERGIC3Q9Y282 383 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 PMF1-BGLAPU3KQ54 211 aa5.25□□□□□ -1.57
LIMA1-215ENST00000552823 KIF26AQ9ULI4 1882 aaPredicted RBP5.24□□□□□ -1.57
LIMA1-215ENST00000552823 A0A087WUU8 490 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 HRKO00198 91 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 B3GALT2O43825 422 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 FGF17O60258 216 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 CLEC3AO75596 197 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 SAGP10523 405 aaPredicted RBP5.24□□□□□ -1.57
LIMA1-215ENST00000552823 ST6GAL1P15907 406 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 GABRG2P18507 467 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 ITIH1P19827 911 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 S100A5P33763 92 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 AHRP35869 848 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 KCNJ5P48544 419 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 PRR5P85299 388 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 IFITM3Q01628 133 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 RBBP4Q09028 425 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 ZNF155Q12901 538 aaPredicted RBP5.24□□□□□ -1.57
LIMA1-215ENST00000552823 PDE7AQ13946 482 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 DUSP5Q16690 384 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 PROX2Q3B8N5 592 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 SAXO2Q658L1 398 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 DESI1Q6ICB0 168 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 ZAR1Q86SH2 424 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 RASGRP3Q8IV61 690 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 PRR22Q8IZ63 422 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 CHCHD4Q8N4Q1 142 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 BBS1Q8NFJ9 593 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 OR4K14Q8NGD5 310 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 OR2L8Q8NGY9 312 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 SUN3Q8TAQ9 357 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 TMEM255BQ8WV15 326 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 SLC38A4Q969I6 547 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 ELP4Q96EB1 424 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 SAMD8Q96LT4 415 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 SLC6A18Q96N87 628 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 RDH12Q96NR8 316 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 TGM7Q96PF1 710 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 MENTQ9BUN1 341 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 TMED9Q9BVK6 235 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 HDHD5Q9BXW7 423 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 FOXQ1Q9C009 403 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 NEUROD4Q9HD90 331 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 NFKBIL1Q9UBC1 381 aaPredicted RBP5.24□□□□□ -1.57
LIMA1-215ENST00000552823 CPNE7Q9UBL6 633 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 PSORS1C1Q9UIG5 152 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 PADI2Q9Y2J8 665 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 ASB4Q9Y574 426 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 TANC1Q9C0D5 1861 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 C2orf92A0A1B0GVN3 265 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 ARHGAP33O14559 1287 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 NCR1O76036 304 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 CDRT1O95170 752 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 CDK1P06493 297 aa5.24□□□□□ -1.57
LIMA1-215ENST00000552823 FCER2P06734 321 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms