RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 ZDHHC5Q9C0B5 715 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SAP130Q9H0E3 1048 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 OR2AG1Q9H205 316 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 OR51I1Q9H343 314 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SYNDIG1Q9H7V2 258 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TBC1D17Q9HA65 648 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 POLMQ9NP87 494 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CNIH4Q9P003 139 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 GSTK1Q9Y2Q3 226 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 HSPB11Q9Y547 144 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 NOTCH4Q99466 2003 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 A0A1B0GVC2 190 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TRDV1A0A1B0GX56 115 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 A0A1W2PS29 197 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 IRGMA1A4Y4 181 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 A6NIN4 97 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PRODHO43272 600 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 AKAP8O43823 692 aaKnown RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SH3BP5O60239 455 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SLC2A10O95528 541 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PRKAR1AP10644 381 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CELP19835 753 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PTNP21246 168 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PSMB5P28074 263 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ACADLP28330 430 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 MMP12P39900 470 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 FRKP42685 505 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 MTNR1AP48039 350 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CCT3P49368 545 aaKnown RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 RRAS2P62070 204 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 RAB40BQ12829 278 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 NDUFA9Q16795 377 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 DUSP6Q16828 381 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SPDYE7PQ495Y7 208 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 EOGTQ5NDL2 527 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PRAMEF14Q5SWL7 426 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PRAMEF13Q5VWM6 474 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 IL20RBQ6UXL0 311 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TMEM91Q6ZNR0 172 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ZNF767PQ75MW2 155 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SZRD1Q7Z422 152 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TRMT11Q7Z4G4 463 aaKnown RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 UBE3DQ7Z6J8 389 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 MARCH9Q86YJ5 346 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TRAPPC5Q8IUR0 188 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ELMOD2Q8IZ81 293 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 LINC00471Q8N535 108 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 NATD1Q8N6N6 113 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 BBS1Q8NFJ9 593 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 OR4M2Q8NGB6 313 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 OR5AR1Q8NGP9 310 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ZFPM2Q8WW38 1151 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ZNF689Q96CS4 500 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ZNF607Q96SK3 696 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 FNDC11Q9BVV2 318 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 GTPBP2Q9BX10 602 aaKnown RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 AICDAQ9GZX7 198 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PPIL3Q9H2H8 161 aaKnown RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TRIM45Q9H8W5 580 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TDP1Q9NUW8 608 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ING3Q9NXR8 418 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SPG21Q9NZD8 308 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 NFKBIL1Q9UBC1 381 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 IL20RAQ9UHF4 553 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 LIPT1Q9Y234 373 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 GPR55Q9Y2T6 319 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 KCNE3Q9Y6H6 103 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CDH10Q9Y6N8 788 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 LOC105371267A0A1B0GV96 52 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 TSPAN11A1L157 253 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 ZSCAN5BA6NJL1 495 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 SNTNA6NMZ2 147 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 LEUTXA8MZ59 168 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 KDM4EB2RXH2 506 aaPredicted RBP5.09□□□□□ -1.59
LIMA1-212ENST00000552491 GABRPO00591 440 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 UBXN7O94888 489 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 STATHP02808 62 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 RB1P06400 928 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 ELFN1P0C7U0 828 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 GAAP10253 952 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 SYN1P17600 705 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 ELK1P19419 428 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 UQCRC1P31930 480 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 SLC1A3P43003 542 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 RAB8AP61006 207 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 DUSP2Q05923 314 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 RIN1Q13671 783 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 ZNF750Q32MQ0 723 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 MINDY4Q4G0A6 757 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 SPOUT1Q5T280 376 aaKnown RBP5.09□□□□□ -1.59
LIMA1-212ENST00000552491 KHDRBS2Q5VWX1 349 aaKnown RBP5.09□□□□□ -1.59
LIMA1-212ENST00000552491 SLC30A6Q6NXT4 461 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 CREB3L2Q70SY1 520 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 DPPA4Q7L190 304 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 PARS2Q7L3T8 475 aaKnown RBP5.09□□□□□ -1.59
LIMA1-212ENST00000552491 MRGPREQ86SM8 312 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 SLC39A11Q8N1S5 342 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 FAM109AQ8N4B1 249 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 C9orf62Q8N4C0 152 aa5.09□□□□□ -1.59
LIMA1-212ENST00000552491 DNAJC5GQ8N7S2 189 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms