RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, human

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB3IP-216	ENST00000552199		H3BN98	237 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	SLC22A1	O15245	554 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	WNT1	P04628	370 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	ATP1B1	P05026	303 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	INHBB	P09529	407 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	ACP2	P11117	423 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	MMP11	P24347	488 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	TGFBR2	P37173	567 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	SHC2	P98077	582 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	ST3GAL4	Q11206	333 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	MOG	Q16653	247 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	DUSP5	Q16690	384 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	C1orf94	Q6P1W5	598 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	IQCH	Q86VS3	1027 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	PRR14	Q9BWN1	585 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	ITPA	Q9BY32	194 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CTPS2	Q9NRF8	586 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CNOT2	Q9NZN8	540 aa	Known RBP	13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199	IFT52	Q9Y366	437 aa		13.11	□□□□□ -0.31
RAB3IP-216	ENST00000552199		A0A087WV62	115 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199		A0A1W2PR77	199 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	KRBA1	A5PL33	1030 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	METTL12	A8MUP2	240 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CLPX	O76031	633 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CSF2	P04141	144 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CDH3	P22223	829 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CD27	P26842	260 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	MAZ	P56270	477 aa	Known RBP	13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	TAS2R41	P59536	307 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	IRF3	Q14653	427 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	SMAD2	Q15796	467 aa	Known RBP	13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CCDC85B	Q15834	202 aa	Predicted RBP	13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	EXOSC6	Q5RKV6	272 aa	Known RBP	13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CLIP4	Q8N3C7	705 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	DEFB119	Q8N690	84 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	TRUB1	Q8WWH5	349 aa	Known RBP	13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	SLC38A4	Q969I6	547 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CHRD	Q9H2X0	955 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	PIGU	Q9H490	435 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	KLHL28	Q9NXS3	571 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	MKLN1	Q9UL63	735 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199	WDR45	Q9Y484	360 aa		13.1	□□□□□ -0.31
RAB3IP-216	ENST00000552199		A0A087WUU8	490 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CLDN24	A6NM45	220 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	SGK494	L7N484	410 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199		M0R082	166 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	FRS3	O43559	492 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	PLOD3	O60568	738 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CYP7B1	O75881	506 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	UBXN7	O94888	489 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CD36	P16671	472 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	TNNI3	P19429	210 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	NT5E	P21589	574 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CD38	P28907	300 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	SLC15A1	P46059	708 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	RAB38	P57729	211 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	LSM11	P83369	360 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	TRAM2	Q15035	370 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	ELOC	Q15369	112 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	PUS10	Q3MIT2	529 aa	Known RBP	13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	ENTPD8	Q5MY95	495 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	TMEM201	Q5SNT2	666 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	TYW3	Q6IPR3	259 aa	Known RBP	13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CROCCP3	Q8IVE0	287 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	GJD3	Q8N144	294 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	ARHGEF39	Q8N4T4	335 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	C19orf47	Q8N9M1	422 aa	Known RBP	13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	DOK4	Q8TEW6	326 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	DIO2	Q92813	273 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CRELD1	Q96HD1	420 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	IL4I1	Q96RQ9	567 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	SDF2	Q99470	211 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	GPA33	Q99795	319 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	SLC25A19	Q9HC21	320 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	ZNF232	Q9UNY5	417 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	TMEM131	Q92545	1883 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	SLC9B1P1	A6NJY1	282 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CPSF4L	A6NMK7	179 aa	Known RBP	13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	ENTPD6	O75354	484 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CTSB	P07858	339 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	IFI6	P09912	130 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CCNYL3	P0C7X3	344 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	LIPA	P38571	399 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	LSM3	P62310	102 aa	Known RBP	13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	MGAT2	Q10469	447 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	UBXN2B	Q14CS0	331 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	TIGD6	Q17RP2	521 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	PRICKLE4	Q2TBC4	344 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	DEFB110	Q30KQ9	67 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	CASP12	Q6UXS9	341 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	MCAT	Q8IVS2	390 aa	Known RBP	13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	PEX5L	Q8IYB4	626 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	ARL14	Q8N4G2	192 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	ZNF675	Q8TD23	568 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	GNPDA2	Q8TDQ7	276 aa		13.09	□□□□□ -0.31
RAB3IP-216	ENST00000552199	ANKRD9	Q96BM1	317 aa	Predicted RBP	13.09	□□□□□ -0.31

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