RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 OR4K17Q8NGC6 315 aa13.72□□□□□ -0.21
CACNB3-220ENST00000551716 RAB3IL1Q8TBN0 382 aa13.72□□□□□ -0.21
CACNB3-220ENST00000551716 STOML1Q9UBI4 398 aa13.72□□□□□ -0.21
CACNB3-220ENST00000551716 PRODH2Q9UF12 536 aa13.72□□□□□ -0.21
CACNB3-220ENST00000551716 BCAP29Q9UHQ4 241 aa13.72□□□□□ -0.21
CACNB3-220ENST00000551716 PCDHGA11Q9Y5H2 935 aa13.72□□□□□ -0.21
CACNB3-220ENST00000551716 FAM234BA2RU67 622 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 PGRMC2O15173 223 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 SSX4O60224 188 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 TMPRSS11DO60235 418 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 EEDO75530 441 aaKnown RBP13.71□□□□□ -0.21
CACNB3-220ENST00000551716 REM1O75628 298 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 PLGP00747 810 aaPredicted RBP13.71□□□□□ -0.21
CACNB3-220ENST00000551716 PSMB1P20618 241 aaKnown RBP13.71□□□□□ -0.21
CACNB3-220ENST00000551716 GRK2P25098 689 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 BSGP35613 385 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 SUCLG1P53597 346 aaKnown RBP13.71□□□□□ -0.21
CACNB3-220ENST00000551716 CLDN15P56746 228 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 MRPS22P82650 360 aaKnown RBP13.71□□□□□ -0.21
CACNB3-220ENST00000551716 FRG1Q14331 258 aaKnown RBP13.71□□□□□ -0.21
CACNB3-220ENST00000551716 SQLEQ14534 574 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 NNATQ16517 81 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 SGCBQ16585 318 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 ZNF672Q499Z4 452 aaPredicted RBP13.71□□□□□ -0.21
CACNB3-220ENST00000551716 FBXO48Q5FWF7 155 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 NCMAPQ5T1S8 102 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 RNASEH2BQ5TBB1 312 aaKnown RBP13.71□□□□□ -0.21
CACNB3-220ENST00000551716 GRHL2Q6ISB3 625 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 TTC27Q6P3X3 843 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 CLEC2AQ6UVW9 174 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 NUDT13Q86X67 352 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 ADCY4Q8NFM4 1077 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 GMPPAQ96IJ6 420 aaPredicted RBP13.71□□□□□ -0.21
CACNB3-220ENST00000551716 ADAD1Q96M93 576 aaKnown RBP13.71□□□□□ -0.21
CACNB3-220ENST00000551716 USB1Q9BQ65 265 aaKnown RBP13.71□□□□□ -0.21
CACNB3-220ENST00000551716 PRRG4Q9BZD6 226 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 GLRX2Q9NS18 164 aa13.71□□□□□ -0.21
CACNB3-220ENST00000551716 IGHV4-30-2A0A087WSY4 118 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 GOLGA6L10A6NI86 522 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 ELOA3DA6NLF2 546 aaPredicted RBP13.7□□□□□ -0.22
CACNB3-220ENST00000551716 LMX1BO60663 402 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 SLC25A16P16260 332 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 HNF1AP20823 631 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 KRT20P35900 424 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 FAPQ12884 760 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 GANABQ14697 944 aaKnown RBP13.7□□□□□ -0.22
CACNB3-220ENST00000551716 ELOA3BQ3SY89 546 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 RAET1LQ5VY80 246 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 OR5M10Q6IEU7 315 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 CCDC137Q6PK04 289 aaKnown RBP13.7□□□□□ -0.22
CACNB3-220ENST00000551716 METTL25Q8N6Q8 603 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 ELOA3Q8NG57 546 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 GRK7Q8WTQ7 553 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 HSD17B8Q92506 261 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 SLC35A4Q96G79 324 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 MTERF1Q99551 399 aaKnown RBP13.7□□□□□ -0.22
CACNB3-220ENST00000551716 TRAF4Q9BUZ4 470 aaPredicted RBP13.7□□□□□ -0.22
CACNB3-220ENST00000551716 ZNF717Q9BY31 904 aaPredicted RBP13.7□□□□□ -0.22
CACNB3-220ENST00000551716 ITPAQ9BY32 194 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 PLA2G12AQ9BZM1 189 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 NSMCE4AQ9NXX6 385 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 EHD3Q9NZN3 535 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 ZNF337Q9Y3M9 751 aa13.7□□□□□ -0.22
CACNB3-220ENST00000551716 A0A096LNT2 108 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 SEC14L5O43304 696 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 NDUFS7O75251 213 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 HK1P19367 917 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 TCEA1P23193 301 aaKnown RBP13.69□□□□□ -0.22
CACNB3-220ENST00000551716 NUDT6P53370 316 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 POU4F1Q01851 419 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 PRICKLE4Q2TBC4 344 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 PGGHGQ32M88 737 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 GLYR1Q49A26 553 aaPredicted RBP13.69□□□□□ -0.22
CACNB3-220ENST00000551716 ALKBH2Q6NS38 261 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 TRMT10BQ6PF06 316 aaKnown RBP13.69□□□□□ -0.22
CACNB3-220ENST00000551716 TMEM139Q8IV31 216 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 IGDCC3Q8IVU1 814 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 PDIK1LQ8N165 341 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 TMBIM1Q969X1 311 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 TSPAN17Q96FV3 270 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 CFAP36Q96G28 342 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 ADOQ96SZ5 270 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 BRINP2Q9C0B6 783 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 PTGES2Q9H7Z7 377 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 SDHAF3Q9NRP4 125 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 PAQR5Q9NXK6 330 aaPredicted RBP13.69□□□□□ -0.22
CACNB3-220ENST00000551716 OPTCQ9UBM4 332 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 GDF2Q9UK05 429 aaPredicted RBP13.69□□□□□ -0.22
CACNB3-220ENST00000551716 GPR55Q9Y2T6 319 aaPredicted RBP13.69□□□□□ -0.22
CACNB3-220ENST00000551716 AP4B1Q9Y6B7 739 aa13.69□□□□□ -0.22
CACNB3-220ENST00000551716 A0A1W2PS29 197 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 K7EPI3 171 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 SS18L1O75177 396 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-220ENST00000551716 GUCY1B2O75343 617 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 BANF1O75531 89 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 BCAS2O75934 225 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-220ENST00000551716 ATP1B1P05026 303 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 CCDC166P0CW27 439 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 CSNK2A2P19784 350 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-220ENST00000551716 ADH6P28332 368 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms