RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 CTAGE9A4FU28 777 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 AKR1B10O60218 316 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 CDH16O75309 829 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 LYZL6O75951 148 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 HAUS5O94927 633 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 ADAP00813 363 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 C1GALT1C1LP0DN25 315 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 FCGR2AP12318 317 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 KRT15P19012 456 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 HIST1H1TP22492 207 aaPredicted RBP11.84□□□□□ -0.51
SNRPF-203ENST00000551316 FDFT1P37268 417 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 HADHBP55084 474 aaKnown RBP11.84□□□□□ -0.51
SNRPF-203ENST00000551316 PLCXD2Q0VAA5 305 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 SNTA1Q13424 505 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 PPP1R3AQ16821 1122 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 MST1LQ2TV78 715 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 DEPDC1Q5TB30 811 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 HLA-DQA1Q5Y7H0 255 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 CASC4Q6P4E1 433 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 Q6ZSR9 355 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 MYO1HQ8N1T3 1032 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 NPAS1Q99742 590 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 RTN4RQ9BZR6 473 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 IL22Q9GZX6 179 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 TRMT6Q9UJA5 497 aaKnown RBP11.84□□□□□ -0.51
SNRPF-203ENST00000551316 SOX13Q9UN79 622 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 USP22Q9UPT9 525 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 MRPS18CQ9Y3D5 142 aaKnown RBP11.84□□□□□ -0.51
SNRPF-203ENST00000551316 PPIAL4AQ9Y536 164 aa11.84□□□□□ -0.51
SNRPF-203ENST00000551316 LOC105371242A0A075B767 164 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 NPIPA5A0A0B4J1W7 369 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 LOC390937A0A1W2PQ73 354 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 NPIPA7E9PJI5 369 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 NME6O75414 186 aaPredicted RBP11.83□□□□□ -0.52
SNRPF-203ENST00000551316 IFNB1P01574 187 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 TACSTD2P09758 323 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 NUDT17P0C025 328 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 NPIPA8P0DM63 369 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 S1PR1P21453 382 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 DEKP35659 375 aaKnown RBP11.83□□□□□ -0.52
SNRPF-203ENST00000551316 EIF1AXP47813 144 aaKnown RBP11.83□□□□□ -0.52
SNRPF-203ENST00000551316 KCNC1P48547 511 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 PPA1Q15181 289 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 C11orf63Q6NUN7 778 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 BHLHA15Q7RTS1 189 aaPredicted RBP11.83□□□□□ -0.52
SNRPF-203ENST00000551316 NUP54Q7Z3B4 507 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 GALNT10Q86SR1 603 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 FADS6Q8N9I5 356 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 RNF138Q8WVD3 245 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 KISS1RQ969F8 398 aaPredicted RBP11.83□□□□□ -0.52
SNRPF-203ENST00000551316 MTBPQ96DY7 904 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 ADGRG7Q96K78 797 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 KCNC2Q96PR1 638 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 DUX5Q96PT3 197 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 MS4A8Q9BY19 250 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 STMN4Q9H169 189 aaPredicted RBP11.83□□□□□ -0.52
SNRPF-203ENST00000551316 LPAR2Q9HBW0 351 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 ZBTB26Q9HCK0 441 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 SLC17A6Q9P2U8 582 aa11.83□□□□□ -0.52
SNRPF-203ENST00000551316 DNAH1Q9P2D7 4330 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 GOLGA6L10A0A0M3HER8 536 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 TCRBV7S3A2A0A539 114 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 ZNF814B7Z6K7 855 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 TJP3O95049 919 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 OPN1LWP04000 364 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 HIST1H2AGP0C0S8 130 aaPredicted RBP11.82□□□□□ -0.52
SNRPF-203ENST00000551316 HK1P19367 917 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 HIST1H2ADP20671 130 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 AP1S2P56377 157 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 EXOSC7Q15024 291 aaKnown RBP11.82□□□□□ -0.52
SNRPF-203ENST00000551316 OASLQ15646 514 aaKnown RBP11.82□□□□□ -0.52
SNRPF-203ENST00000551316 SLC22A25Q6T423 547 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 OR2M3Q8NG83 312 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 OR10D3Q8NH80 312 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 ZBTB8AQ96BR9 441 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 HIST1H2AHQ96KK5 128 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 NAP1L3Q99457 506 aaPredicted RBP11.82□□□□□ -0.52
SNRPF-203ENST00000551316 HIST1H2AJQ99878 128 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 H2AFJQ9BTM1 129 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 CCDC68Q9H2F9 335 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 DSN1Q9H410 356 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 POU2F3Q9UKI9 436 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.82□□□□□ -0.52
SNRPF-203ENST00000551316 SNX8Q9Y5X2 465 aa11.82□□□□□ -0.52
SNRPF-203ENST00000551316 SYCE3A1L190 88 aa11.81□□□□□ -0.52
SNRPF-203ENST00000551316 ANKDD1BA6NHY2 528 aa11.81□□□□□ -0.52
SNRPF-203ENST00000551316 GOLGA8MH3BSY2 632 aa11.81□□□□□ -0.52
SNRPF-203ENST00000551316 EIF1AYO14602 144 aaKnown RBP11.81□□□□□ -0.52
SNRPF-203ENST00000551316 PFDN6O15212 129 aa11.81□□□□□ -0.52
SNRPF-203ENST00000551316 CXCL13O43927 109 aa11.81□□□□□ -0.52
SNRPF-203ENST00000551316 GPR75O95800 540 aa11.81□□□□□ -0.52
SNRPF-203ENST00000551316 SSR2P43308 183 aa11.81□□□□□ -0.52
SNRPF-203ENST00000551316 DSCR4P56555 118 aaPredicted RBP11.81□□□□□ -0.52
SNRPF-203ENST00000551316 SLAMF1Q13291 335 aa11.81□□□□□ -0.52
SNRPF-203ENST00000551316 SGCBQ16585 318 aa11.81□□□□□ -0.52
SNRPF-203ENST00000551316 FBXO48Q5FWF7 155 aa11.81□□□□□ -0.52
SNRPF-203ENST00000551316 STK32CQ86UX6 486 aa11.81□□□□□ -0.52
SNRPF-203ENST00000551316 C17orf47Q8NEP4 570 aa11.81□□□□□ -0.52
SNRPF-203ENST00000551316 TTLQ8NG68 377 aa11.81□□□□□ -0.52
SNRPF-203ENST00000551316 OR2W6PQ8NHA6 318 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms