RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 C19orf60Q96EN9 201 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 LINGO1Q96FE5 620 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 SMIM10Q96HG1 83 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 REXO5Q96IC2 774 aaKnown RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 LYZL4Q96KX0 146 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 UBXN10Q96LJ8 280 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 CATSPER2Q96P56 530 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 PANX3Q96QZ0 392 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 KRT12Q99456 494 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 PRPF18Q99633 342 aaKnown RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 FERMT1Q9BQL6 677 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 TRIM31Q9BZY9 425 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 ING2Q9H160 280 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 WDR54Q9H977 334 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 CAB39LQ9H9S4 337 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 SYTL2Q9HCH5 934 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 HOMER3Q9NSC5 361 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 CUTCQ9NTM9 273 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 P4HTMQ9NXG6 502 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 AKAP7Q9P0M2 348 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 LUZP4Q9P127 313 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 COPG2Q9UBF2 871 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 ASIC3Q9UHC3 531 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 SLC12A4Q9UP95 1085 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 SNX24Q9Y343 169 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 SAR1BQ9Y6B6 198 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 MAU2Q9Y6X3 613 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 PCNX3Q9H6A9 2034 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 ARHGAP21Q5T5U3 1957 aa4.54□□□□□ -1.68
SCAF11-214ENST00000550893 TEP1Q99973 2627 aaKnown RBP4.54□□□□□ -1.68
SCAF11-214ENST00000550893 HCFC1P51610 2035 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 PHF3Q92576 2039 aaKnown RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 LOC102723996A0A087X1L8 192 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 IGKV3D-11A0A0A0MRZ8 115 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 FEZF1A0PJY2 475 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 AQP12BA6NM10 295 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 ZBTB14O43829 449 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 MT-ND3P03897 115 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 ALDOAP04075 364 aaKnown RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 PTMAP06454 111 aaKnown RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 ALDOCP09972 364 aaKnown RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 SLC35E2BP0CK96 405 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 CDH1P12830 882 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 ENO3P13929 434 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 MMP11P24347 488 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 TNNT3P45378 269 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 CCR10P46092 362 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 NR0B1P51843 470 aaKnown RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 TDGF1P3P51864 188 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 HNRNPFP52597 415 aaKnown RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 P2RX3P56373 397 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 FAM3BP58499 235 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 REEP5Q00765 189 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 RHAGQ02094 409 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 RELAQ04206 551 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 KLC1Q07866 573 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 PRKAA1Q13131 559 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 ARHGAP19Q14CB8 494 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 FBXO48Q5FWF7 155 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 WASHC2DQ5SRD0 308 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 ZNF324BQ6AW86 544 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 HIST2H2BCQ6DN03 193 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 AGTRAPQ6RW13 159 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 TMEM205Q6UW68 189 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 IGFL3Q6UXB1 125 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 SYT10Q6XYQ8 523 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 CMC1Q7Z7K0 106 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 LMNTD2Q8IXW0 634 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 SPATA6LQ8N4H0 392 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 OR5T3Q8NGG3 340 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 STT3BQ8TCJ2 826 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 ADAMTS15Q8TE58 950 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 SMPDL3AQ92484 453 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 TSLPQ969D9 159 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 NEIL2Q969S2 332 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 FBXL8Q96CD0 374 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 CFAP36Q96G28 342 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 SNF8Q96H20 258 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 PDLIM5Q96HC4 596 aaKnown RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 VPS39Q96JC1 886 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 IMMP1LQ96LU5 166 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 QRFPRQ96P65 431 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 TAAR6Q96RI8 345 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 ATOH8Q96SQ7 321 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 GPR22Q99680 433 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 SELENOSQ9BQE4 189 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 ERP44Q9BS26 406 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 FAM167BQ9BTA0 163 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 ANP32EQ9BTT0 268 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 MECRQ9BV79 373 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 ZNF717Q9BY31 904 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 FUT8Q9BYC5 575 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 TXLNGYQ9BZA5 131 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 ATG10Q9H0Y0 220 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 DPH5Q9H2P9 285 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 TP63Q9H3D4 680 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 CCDC134Q9H6E4 229 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 SPAG4Q9NPE6 437 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 ANKMY1Q9P2S6 941 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 CDC23Q9UJX2 597 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms