RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 LCORQ96JN0 433 aaPredicted RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 C18orf12Q96KH6 178 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 UCN2Q96RP3 112 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 TM9SF2Q99805 663 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 LRRC1Q9BTT6 524 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 SFXN3Q9BWM7 321 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 OSBPL11Q9BXB4 747 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 ITPAQ9BY32 194 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 FUT8Q9BYC5 575 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 MRPL1Q9BYD6 325 aaKnown RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 BRINP2Q9C0B6 783 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 NXF5Q9H1B4 397 aaKnown RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 VPS11Q9H270 941 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 ACBD3Q9H3P7 528 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 ELOVL6Q9H5J4 265 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 ACSS3Q9H6R3 686 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 ZBTB26Q9HCK0 441 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 ZDHHC18Q9NUE0 388 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 MAT2BQ9NZL9 334 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 XPR1Q9UBH6 696 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 ZNF639Q9UID6 485 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 PCTPQ9UKL6 214 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 CES1P1Q9UKY3 287 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 DTX4Q9Y2E6 619 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 PCDHA9Q9Y5H5 950 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 PRAMEF25A6NGN4 478 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 FRG2CA6NGY1 282 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 H0Y3Z8 333 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 TO15178 435 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 ICOSLGO75144 302 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 SMIM24O75264 130 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 UGT2B11O75310 529 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 CBR3O75828 277 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 RCBTB2O95199 551 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 ATE1O95260 518 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 RPS17P08708 135 aaKnown RBP6.93□□□□□ -1.3
NEK3-201ENST00000550331 INHBBP09529 407 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 TMIGD3P0DMS9 266 aaPredicted RBP6.93□□□□□ -1.3
NEK3-201ENST00000550331 COL6A2P12110 1019 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 DRD5P21918 477 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 CHMP24386 653 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 DEKP35659 375 aaKnown RBP6.93□□□□□ -1.3
NEK3-201ENST00000550331 PTGDSP41222 190 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 PPICP45877 212 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 ETF1P62495 437 aaKnown RBP6.93□□□□□ -1.3
NEK3-201ENST00000550331 TRA2BP62995 288 aaKnown RBP6.93□□□□□ -1.3
NEK3-201ENST00000550331 PSPHP78330 225 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 GALNT1Q10472 559 aaPredicted RBP6.93□□□□□ -1.3
NEK3-201ENST00000550331 KEAP1Q14145 624 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 NNATQ16517 81 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 DEFB113Q30KQ7 82 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 FBXW10Q5XX13 1052 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 SHISA2Q6UWI4 295 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 C8orf86Q6ZUL3 223 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 CXXC5Q7LFL8 322 aaKnown RBP6.93□□□□□ -1.3
NEK3-201ENST00000550331 COMMD6Q7Z4G1 85 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 MILR1Q7Z6M3 343 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 ADGRE4PQ86SQ3 457 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 YRDCQ86U90 279 aaKnown RBP6.93□□□□□ -1.3
NEK3-201ENST00000550331 PLD6Q8N2A8 252 aaKnown RBP6.93□□□□□ -1.3
NEK3-201ENST00000550331 GBP7Q8N8V2 638 aaPredicted RBP6.93□□□□□ -1.3
NEK3-201ENST00000550331 C9orf106Q8NAJ2 232 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 WFDC11Q8NEX6 87 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 OR4F6Q8NGB9 312 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 SPATA3Q8NHX4 192 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 SLC44A1Q8WWI5 657 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 SMPDL3BQ92485 455 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 ANP32BQ92688 251 aaKnown RBP6.93□□□□□ -1.3
NEK3-201ENST00000550331 CTHRC1Q96CG8 243 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 KLHL29Q96CT2 875 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 OMA1Q96E52 524 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 PHF21BQ96EK2 531 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 DACH2Q96NX9 599 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 NSUN5Q96P11 429 aaKnown RBP6.93□□□□□ -1.3
NEK3-201ENST00000550331 NODALQ96S42 347 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 FAIM2Q9BWQ8 316 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 C1QTNF3Q9BXJ4 246 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 OR2B2Q9GZK3 357 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 EPB41L4BQ9H329 900 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 PLEKHF2Q9H8W4 249 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 BRF2Q9HAW0 419 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 GALNT9Q9HCQ5 603 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 NMRK1Q9NWW6 199 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 KLRF1Q9NZS2 232 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 PRODH2Q9UF12 536 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 BCAP29Q9UHQ4 241 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 PSME2Q9UL46 239 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 SNX6Q9UNH7 406 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 SLC12A4Q9UP95 1085 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 EXO1Q9UQ84 846 aaKnown RBP6.93□□□□□ -1.3
NEK3-201ENST00000550331 PLLPQ9Y342 182 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 ATRQ13535 2644 aa6.93□□□□□ -1.3
NEK3-201ENST00000550331 ARHGAP21Q5T5U3 1957 aa6.92□□□□□ -1.3
NEK3-201ENST00000550331 ESYT3A0FGR9 886 aa6.92□□□□□ -1.3
NEK3-201ENST00000550331 OR6C70A6NIJ9 312 aa6.92□□□□□ -1.3
NEK3-201ENST00000550331 CLCA1A8K7I4 914 aa6.92□□□□□ -1.3
NEK3-201ENST00000550331 ERAL1O75616 437 aaKnown RBP6.92□□□□□ -1.3
NEK3-201ENST00000550331 CBX7O95931 251 aa6.92□□□□□ -1.3
NEK3-201ENST00000550331 PDYNP01213 254 aa6.92□□□□□ -1.3
NEK3-201ENST00000550331 HEXAP06865 529 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms