RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 PROK2Q9HC23 129 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 AGPAT4Q9NRZ5 378 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 CNOT11Q9UKZ1 510 aaKnown RBP20.72■□□□□ 0.91
BRF1-216ENST00000550208 PCDHGB4Q9UN71 923 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 OR10H1Q9Y4A9 318 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 TP53I11O14683 189 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 CRYABP02511 175 aaKnown RBP20.71■□□□□ 0.91
BRF1-216ENST00000550208 PGRP06401 933 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 MST1P26927 711 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 RFC3P40938 356 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 TMED10P49755 219 aaKnown RBP20.71■□□□□ 0.91
BRF1-216ENST00000550208 FOXK1P85037 733 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 PRR5P85299 388 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 ZNHIT3Q15649 155 aaPredicted RBP20.71■□□□□ 0.91
BRF1-216ENST00000550208 RNFT1Q5M7Z0 435 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 CLEC4FQ8N1N0 589 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 OR2M7Q8NG81 312 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 OR5AK3PQ8NH89 298 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 SPPL2AQ8TCT8 520 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 STON2Q8WXE9 905 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 HOXB13Q92826 284 aaPredicted RBP20.71■□□□□ 0.91
BRF1-216ENST00000550208 HGDQ93099 445 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 RILPQ96NA2 401 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 MS4A4EQ96PG1 132 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 SIKE1Q9BRV8 207 aa20.71■□□□□ 0.91
BRF1-216ENST00000550208 FAM120CQ9NX05 1096 aaKnown RBP20.71■□□□□ 0.91
BRF1-216ENST00000550208 SHANK1Q9Y566 2161 aa20.7■□□□□ 0.91
BRF1-216ENST00000550208 GXYLT2A0PJZ3 443 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 TSPAN2O60636 221 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 UGT2B11O75310 529 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 HMGN2P05204 90 aaKnown RBP20.7■□□□□ 0.9
BRF1-216ENST00000550208 ACP2P11117 423 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 DNASE1L1P49184 302 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 MRPL19P49406 292 aaKnown RBP20.7■□□□□ 0.9
BRF1-216ENST00000550208 POLR2JP52435 117 aaKnown RBP20.7■□□□□ 0.9
BRF1-216ENST00000550208 CYP27C1Q4G0S4 372 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 PRAMEF20Q5VT98 475 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 BICRALQ6AI39 1079 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 MFSD12Q6NUT3 480 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 FBXW8Q8N3Y1 598 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 CDRT4Q8N9R6 151 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 SLC16A11Q8NCK7 471 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 OR56A1Q8NGH5 318 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 FBXO30Q8TB52 745 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 SFXN5Q8TD22 340 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 GPR151Q8TDV0 419 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 PIK3R3Q92569 461 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 SLC9A6Q92581 669 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 DIO2Q92813 273 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 OTUB1Q96FW1 271 aaPredicted RBP20.7■□□□□ 0.9
BRF1-216ENST00000550208 FRMD6Q96NE9 622 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 ZNF317Q96PQ6 595 aaPredicted RBP20.7■□□□□ 0.9
BRF1-216ENST00000550208 NODALQ96S42 347 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 ADOQ96SZ5 270 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 NEUROD4Q9HD90 331 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 OLAHQ9NV23 265 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 CNIH4Q9P003 139 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 BTNL2Q9UIR0 455 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 CBLCQ9ULV8 474 aa20.7■□□□□ 0.9
BRF1-216ENST00000550208 TTC36A6NLP5 189 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 NKX2-2O95096 273 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 IL6P05231 212 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 TROVE2P10155 538 aaKnown RBP eCLIP20.69■□□□□ 0.9
BRF1-216ENST00000550208 SOAT1P35610 550 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 PRIM2P49643 509 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 GYS2P54840 703 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 STX1BP61266 288 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 TP53BP2Q13625 1128 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 LASP1Q14847 261 aaKnown RBP20.69■□□□□ 0.9
BRF1-216ENST00000550208 EXOSC6Q5RKV6 272 aaKnown RBP20.69■□□□□ 0.9
BRF1-216ENST00000550208 ZCCHC12Q6PEW1 402 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 C6orf120Q7Z4R8 191 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 ZFP62Q8NB50 900 aaPredicted RBP20.69■□□□□ 0.9
BRF1-216ENST00000550208 NR4A3Q92570 626 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 SLC35A4Q96G79 324 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 CCDC115Q96NT0 180 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 COL21A1Q96P44 957 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 FAM173AQ9BQD7 235 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 INPP5KQ9BT40 448 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 TMEM120AQ9BXJ8 343 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 Q9N2J8 555 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 GPATCH2Q9NW75 528 aa20.69■□□□□ 0.9
BRF1-216ENST00000550208 TUBA8Q9NY65 449 aaPredicted RBP20.69■□□□□ 0.9
BRF1-216ENST00000550208 FAM234BA2RU67 622 aa20.68■□□□□ 0.9
BRF1-216ENST00000550208 OR6C70A6NIJ9 312 aa20.68■□□□□ 0.9
BRF1-216ENST00000550208 J3QKU1 62 aa20.68■□□□□ 0.9
BRF1-216ENST00000550208 ALOX5P09917 674 aa20.68■□□□□ 0.9
BRF1-216ENST00000550208 NCF2P19878 526 aaPredicted RBP20.68■□□□□ 0.9
BRF1-216ENST00000550208 CASP3P42574 277 aa20.68■□□□□ 0.9
BRF1-216ENST00000550208 PSPHP78330 225 aa20.68■□□□□ 0.9
BRF1-216ENST00000550208 ALDH6A1Q02252 535 aaKnown RBP20.68■□□□□ 0.9
BRF1-216ENST00000550208 DUSP5Q16690 384 aa20.68■□□□□ 0.9
BRF1-216ENST00000550208 FUNDC1Q8IVP5 155 aa20.68■□□□□ 0.9
BRF1-216ENST00000550208 POGLUT1Q8NBL1 392 aa20.68■□□□□ 0.9
BRF1-216ENST00000550208 GOT1L1Q8NHS2 421 aaPredicted RBP20.68■□□□□ 0.9
BRF1-216ENST00000550208 MOAP1Q96BY2 351 aa20.68■□□□□ 0.9
BRF1-216ENST00000550208 EFHD2Q96C19 240 aaPredicted RBP20.68■□□□□ 0.9
BRF1-216ENST00000550208 SECISBP2Q96T21 854 aaKnown RBP20.68■□□□□ 0.9
BRF1-216ENST00000550208 NINQ8N4C6 2090 aa20.68■□□□□ 0.9
BRF1-216ENST00000550208 CD1EP15812 388 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms