RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 PUM1Q14671 1186 aaKnown RBP eCLIP14.16□□□□□ -0.143e-7■■□□□ 11.4
CUX1-214ENST00000550008 PODNL1Q6PEZ8 512 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 RBM45Q8IUH3 476 aaKnown RBP14.16□□□□□ -0.14
CUX1-214ENST00000550008 OR4K13Q8NH42 304 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 NEIL3Q8TAT5 605 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 ADAD1Q96M93 576 aaKnown RBP14.16□□□□□ -0.14
CUX1-214ENST00000550008 NIPSNAP1Q9BPW8 284 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 ARAFP10398 606 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 FAM111BQ6SJ93 734 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 PRR22Q8IZ63 422 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 ADAMTS16Q8TE57 1224 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 CHTF18Q8WVB6 975 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 NRTNQ99748 197 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 SPNS1Q9H2V7 528 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 ZNF385DQ9H6B1 395 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 SEC14L4Q9UDX3 406 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 NAALAD2Q9Y3Q0 740 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 SEMA3DO95025 777 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 GPX2P18283 190 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 NDUFV2P19404 249 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 GGT2P36268 569 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 GABARAPL2P60520 117 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 LILRA6Q6PI73 481 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 LINGO2Q7L985 606 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 CPOQ8IVL8 374 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 OR9A4Q8NGU2 314 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 MOAP1Q96BY2 351 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 TMCO6Q96DC7 493 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 MS4A8Q9BY19 250 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 ACTL8Q9H568 366 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 TRIM36Q9NQ86 728 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 CPNE7Q9UBL6 633 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 SLC7A7Q9UM01 511 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 ASPDHA6ND91 283 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 DCKP27707 260 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 DSG2Q14126 1118 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 PIP5KL1Q5T9C9 394 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 SLC29A4Q7RTT9 530 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 ZNF527Q8NB42 609 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 CCL4L1Q8NHW4 92 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 FNDC8Q8TC99 324 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 COQ8BQ96D53 544 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 AMBRA1Q9C0C7 1298 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 OR6C2Q9NZP2 312 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 ERVK-11Q9UQG0 969 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 SNX11Q9Y5W9 270 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 ANXA2P2A6NMY6 339 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 H0YC42 278 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 FOXE1O00358 373 aaPredicted RBP14.15□□□□□ -0.14
CUX1-214ENST00000550008 HOXC11O43248 304 aaPredicted RBP14.15□□□□□ -0.14
CUX1-214ENST00000550008 DHFRP00374 187 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 GASTP01350 101 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 ANXA2P07355 339 aaKnown RBP14.15□□□□□ -0.14
CUX1-214ENST00000550008 SLC14A1Q13336 389 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 ALG10BQ5I7T1 473 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 IGFN1Q86VF2 1251 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 CHST4Q8NCG5 386 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 SLC41A3Q96GZ6 507 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 HSPA12BQ96MM6 686 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 EXO5Q9H790 373 aa14.15□□□□□ -0.14
CUX1-214ENST00000550008 ALPK2Q86TB3 2170 aa14.15□□□□□ -0.15
CUX1-214ENST00000550008 EIF1AYO14602 144 aaKnown RBP14.14□□□□□ -0.15
CUX1-214ENST00000550008 CAPNS1P04632 268 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 GYPBP06028 91 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 F3P13726 295 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 PHC1P78364 1004 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 CSNK1G2P78368 415 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 TMEM44Q2T9K0 475 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 RASGRP3Q8IV61 690 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 DENND6BQ8NEG7 585 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 MYADMQ96S97 322 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 MCOLN1Q9GZU1 580 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 MMP27Q9H306 513 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 SPHK1Q9NYA1 384 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 WDR37Q9Y2I8 494 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 A0A0G2JPF8 293 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 OR5K4A6NMS3 321 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 HNRNPCL3B7ZW38 293 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 HNRNPCL4P0DMR1 293 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 ZNF823P16415 610 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 EPHA2P29317 976 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 CD83Q01151 205 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 RPTNQ6XPR3 784 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 ZNF367Q7RTV3 350 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 YIPF7Q8N8F6 280 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 OR2L3Q8NG85 312 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 TM4SF18Q96CE8 201 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 EPYCQ99645 322 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.14□□□□□ -0.15
CUX1-214ENST00000550008 CLEC4MQ9H2X3 399 aaPredicted RBP14.14□□□□□ -0.15
CUX1-214ENST00000550008 GLIPR2Q9H4G4 154 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 KLHL31Q9H511 634 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 SERTAD3Q9UJW9 196 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 SH3PXD2BA1X283 911 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 SOX1O00570 391 aaPredicted RBP14.14□□□□□ -0.15
CUX1-214ENST00000550008 JRKO75564 520 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 PROS1P07225 676 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 CHMP24386 653 aa14.14□□□□□ -0.15
CUX1-214ENST00000550008 ATP5A1P25705 553 aaKnown RBP14.14□□□□□ -0.15
CUX1-214ENST00000550008 MAGEA8P43361 318 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms