RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 RSL1D1O76021 490 aaKnown RBP14.89□□□□□ -0.03
VPS29-207ENST00000549970 EPPINO95925 133 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 JUNP05412 331 aaKnown RBP14.89□□□□□ -0.03
VPS29-207ENST00000549970 CAPN3P20807 821 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 BMP5P22003 454 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 KRT20P35900 424 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 NCBP2P52298 156 aaKnown RBP eCLIP14.89□□□□□ -0.03
VPS29-207ENST00000549970 PRSS53Q2L4Q9 553 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 NHSL2Q5HYW2 709 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 CLEC6AQ6EIG7 209 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 FAM71E1Q6IPT2 247 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 TRIM46Q7Z4K8 759 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 WDSUB1Q8N9V3 476 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 RDH11Q8TC12 318 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 SLC35A4Q96G79 324 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 WDYHV1Q96HA8 205 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 RRAGDQ9NQL2 400 aaPredicted RBP14.89□□□□□ -0.03
VPS29-207ENST00000549970 OXSMQ9NWU1 459 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 TAS2R9Q9NYW1 312 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 KIAA1549Q9HCM3 1950 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 MYO1GB0I1T2 1018 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 DVL2O14641 736 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 TSPAN2O60636 221 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 ABCB7O75027 752 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 UROSP10746 265 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 IL12BP29460 328 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 MC3RP41968 323 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 DLX5P56178 289 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 ZNF155Q12901 538 aaPredicted RBP14.88□□□□□ -0.03
VPS29-207ENST00000549970 SNTB1Q13884 538 aaKnown RBP14.88□□□□□ -0.03
VPS29-207ENST00000549970 LIPMQ5VYY2 423 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 TMEM107Q6UX40 140 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 LARP4Q71RC2 724 aaKnown RBP eCLIP14.88□□□□□ -0.039e-6■■□□□ 12.1
VPS29-207ENST00000549970 CDH24Q86UP0 819 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 TMEM200AQ86VY9 491 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 LACC1Q8IV20 430 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 C10orf107Q8IVU9 208 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 SLC44A2Q8IWA5 706 aaPredicted RBP14.88□□□□□ -0.03
VPS29-207ENST00000549970 RELL2Q8NC24 303 aaPredicted RBP14.88□□□□□ -0.03
VPS29-207ENST00000549970 OR4N2Q8NGD1 307 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 OR14L1PQ8NHC6 308 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 EFHD2Q96C19 240 aaPredicted RBP14.88□□□□□ -0.03
VPS29-207ENST00000549970 TRIB1Q96RU8 372 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 STMN4Q9H169 189 aaPredicted RBP14.88□□□□□ -0.03
VPS29-207ENST00000549970 L2HGDHQ9H9P8 463 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 MYNNQ9NPC7 610 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 KCNN3Q9UGI6 736 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 EXO1Q9UQ84 846 aaKnown RBP14.88□□□□□ -0.03
VPS29-207ENST00000549970 FIS1Q9Y3D6 152 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 OR10H1Q9Y4A9 318 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 PTGDR2Q9Y5Y4 395 aa14.88□□□□□ -0.03
VPS29-207ENST00000549970 CELSR1Q9NYQ6 3014 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 TLDC2A0PJX2 215 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 COQ9O75208 318 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 SEC22BO75396 215 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 CBR3O75828 277 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 IL2RAP01589 272 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 NTSP30990 170 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 UQCRC1P31930 480 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 CEACAM8P31997 349 aaPredicted RBP14.87□□□□□ -0.03
VPS29-207ENST00000549970 GCKP35557 465 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 TIMP3P35625 211 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 SLC18A2Q05940 514 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 EFR3AQ14156 821 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 SF3B4Q15427 424 aaKnown RBP eCLIP14.87□□□□□ -0.032e-7■■■■□ 25.8
VPS29-207ENST00000549970 SH2D4BQ5SQS7 431 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 CES4AQ5XG92 561 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 NSUN5P2Q63ZY6 315 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 OR5M10Q6IEU7 315 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 NOXRED1Q6NXP6 359 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 OR2W6PQ8NHA6 318 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 FAM76AQ8TAV0 307 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.87□□□□□ -0.03
VPS29-207ENST00000549970 OR2B2Q9GZK3 357 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 GLIPR2Q9H4G4 154 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 SLC24A3Q9HC58 644 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 MID2Q9UJV3 735 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 L3MBTL1Q9Y468 752 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 WIF1Q9Y5W5 379 aa14.87□□□□□ -0.03
VPS29-207ENST00000549970 ANKRD17O75179 2603 aaKnown RBP14.86□□□□□ -0.03
VPS29-207ENST00000549970 ZWINTO95229 277 aa14.86□□□□□ -0.03
VPS29-207ENST00000549970 ACTL6AO96019 429 aa14.86□□□□□ -0.03
VPS29-207ENST00000549970 ZNF136P52737 540 aa14.86□□□□□ -0.03
VPS29-207ENST00000549970 RCAN2Q14206 197 aa14.86□□□□□ -0.03
VPS29-207ENST00000549970 PCLAFQ15004 111 aa14.86□□□□□ -0.03
VPS29-207ENST00000549970 ARSKQ6UWY0 536 aa14.86□□□□□ -0.03
VPS29-207ENST00000549970 PLCZ1Q86YW0 608 aa14.86□□□□□ -0.03
VPS29-207ENST00000549970 GFM2Q969S9 779 aaKnown RBP14.86□□□□□ -0.03
VPS29-207ENST00000549970 EGLN2Q96KS0 407 aa14.86□□□□□ -0.03
VPS29-207ENST00000549970 GATA5Q9BWX5 397 aaPredicted RBP14.86□□□□□ -0.03
VPS29-207ENST00000549970 IQCGQ9H095 443 aaKnown RBP14.86□□□□□ -0.03
VPS29-207ENST00000549970 ANKZF1Q9H8Y5 726 aa14.86□□□□□ -0.03
VPS29-207ENST00000549970 DDX18Q9NVP1 670 aaKnown RBP14.86□□□□□ -0.03
VPS29-207ENST00000549970 TAS2R7Q9NYW3 318 aa14.86□□□□□ -0.03
VPS29-207ENST00000549970 FBXL2Q9UKC9 423 aa14.86□□□□□ -0.03
VPS29-207ENST00000549970 A0A087WV62 115 aa14.85□□□□□ -0.03
VPS29-207ENST00000549970 CD8B2A6NJW9 211 aa14.85□□□□□ -0.03
VPS29-207ENST00000549970 C17orf51A8MQB3 221 aa14.85□□□□□ -0.03
VPS29-207ENST00000549970 SLC28A1O00337 649 aa14.85□□□□□ -0.03
VPS29-207ENST00000549970 AZIN1O14977 448 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms