RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 IKBIPQ70UQ0 350 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 NUP54Q7Z3B4 507 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 CCDC71Q8IV32 467 aaPredicted RBP8.94□□□□□ -0.98
HDAC7-229ENST00000549883 SAMD14Q8IZD0 417 aaPredicted RBP8.94□□□□□ -0.98
HDAC7-229ENST00000549883 SLC34A3Q8N130 599 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 OR2L13Q8N349 312 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 LIX1Q8N485 282 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 ZNF808Q8N4W9 903 aaPredicted RBP8.94□□□□□ -0.98
HDAC7-229ENST00000549883 ANKRD42Q8N9B4 389 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 WDSUB1Q8N9V3 476 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 FBXO30Q8TB52 745 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 PPCDCQ96CD2 204 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 OTUB1Q96FW1 271 aaPredicted RBP8.94□□□□□ -0.98
HDAC7-229ENST00000549883 PGM2Q96G03 612 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 ZNF597Q96LX8 424 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 ADOQ96SZ5 270 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 VKORC1Q9BQB6 163 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 UBQLN3Q9H347 655 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 REEP4Q9H6H4 257 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 LDAHQ9H6V9 325 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 EXO5Q9H790 373 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 METTL7AQ9H8H3 244 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 SSU72Q9NP77 194 aaKnown RBP8.94□□□□□ -0.98
HDAC7-229ENST00000549883 EQTNQ9NQ60 294 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 SERHLQ9NQF3 203 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 PNPOQ9NVS9 261 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 SH3BP4Q9P0V3 963 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 PRODH2Q9UF12 536 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 BOKQ9UMX3 212 aaPredicted RBP8.94□□□□□ -0.98
HDAC7-229ENST00000549883 MAPRE3Q9UPY8 281 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 CFL2Q9Y281 166 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 C15orf41Q9Y2V0 281 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 FAM215AQ9Y5M1 114 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 INTS1Q8N201 2190 aaKnown RBP8.94□□□□□ -0.98
HDAC7-229ENST00000549883 CRYBG3Q68DQ2 2970 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 A0A087WV62 115 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 PRAMEF25A6NGN4 478 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 CAPN14A8MX76 684 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 PLOD2O00469 737 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 AQP7O14520 342 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 ACOX3O15254 700 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 BIRC5O15392 142 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 PDPK1O15530 556 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 SUSD5O60279 629 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 TRAPPC6AO75865 159 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 SNX4O95219 450 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 SERPINE1P05121 402 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 SNRPB2P08579 225 aaKnown RBP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 LAMP1P11279 417 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 NAGAP17050 411 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 TCEA1P23193 301 aaKnown RBP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 HTR1EP28566 365 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 NTSP30990 170 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 FRKP42685 505 aaPredicted RBP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 KIR3DL1P43629 444 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 MASP1P48740 699 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 TMED10P49755 219 aaKnown RBP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 PMPCAQ10713 525 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 GAB1Q13480 694 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 ART3Q13508 389 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 PDCD2Q16342 344 aaPredicted RBP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 WIPI1Q5MNZ9 446 aaPredicted RBP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 TMEM198Q66K66 360 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 TIGD3Q6B0B8 471 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 LRIG3Q6UXM1 1119 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 LARP4Q71RC2 724 aaKnown RBP eCLIP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 GALNT10Q86SR1 603 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 YRDCQ86U90 279 aaKnown RBP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 PACS2Q86VP3 889 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 PPP1R14CQ8TAE6 165 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 NEIL3Q8TAT5 605 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 MGARPQ8TDB4 240 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 PIK3R3Q92569 461 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 SDCCAG3Q96C92 435 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 TUBGCP3Q96CW5 907 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 ERP27Q96DN0 273 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 GIMAP5Q96F15 307 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 SLC35A4Q96G79 324 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 C16orf58Q96GQ5 468 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 TMEM41AQ96HV5 264 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 METTL2AQ96IZ6 378 aaKnown RBP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 COL21A1Q96P44 957 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 SECISBP2Q96T21 854 aaKnown RBP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 PAIP2Q9BPZ3 127 aaKnown RBP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 OSBPL11Q9BXB4 747 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 UCK2Q9BZX2 261 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 SIRT3Q9NTG7 399 aaPredicted RBP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 DDX18Q9NVP1 670 aaKnown RBP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 FBXO34Q9NWN3 711 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 ALKBH4Q9NXW9 302 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 TAS2R9Q9NYW1 312 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 ATP6V1HQ9UI12 483 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 FBXL2Q9UKC9 423 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 ACAD8Q9UKU7 415 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 RNF6Q9Y252 685 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 WBP11Q9Y2W2 641 aaKnown RBP8.93□□□□□ -0.98
HDAC7-229ENST00000549883 DOCK7Q96N67 2140 aa8.93□□□□□ -0.98
HDAC7-229ENST00000549883 MED12LQ86YW9 2145 aa8.92□□□□□ -0.98
HDAC7-229ENST00000549883 TMEM120BA0PK00 339 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms