RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 PCYOX1LQ8NBM8 494 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 SLC22A8Q8TCC7 542 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 GPR151Q8TDV0 419 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 PIK3R3Q92569 461 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 CGREF1Q99674 301 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 TRIM8Q9BZR9 551 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 OR51I1Q9H343 314 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 PLA2G3Q9NZ20 509 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 OR10H1Q9Y4A9 318 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 TNRC6AQ8NDV7 1962 aaKnown RBP19.57■□□□□ 0.72
VPS29-206ENST00000549578 GXYLT2A0PJZ3 443 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 NKX2-2O95096 273 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 CBX6O95503 412 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 WDPCPO95876 746 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 SOX3P41225 446 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 MVDP53602 400 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 KCNAB2Q13303 367 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.56■□□□□ 0.72
VPS29-206ENST00000549578 TAGAPQ8N103 731 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 HORMAD2Q8N7B1 307 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 ADAMTS15Q8TE58 950 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 ASB15Q8WXK1 588 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 CDS1Q92903 461 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 LRRC58Q96CX6 371 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 HSPBAP1Q96EW2 488 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 OR7D2Q96RA2 312 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 IKZF5Q9H5V7 419 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 Q9N2J8 555 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 ABI3Q9P2A4 366 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 TAGLN3Q9UI15 199 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 KCNE3Q9Y6H6 103 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 CNTRLQ7Z7A1 2325 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 TO15178 435 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 ACOX3O15254 700 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 OR6B1O95007 311 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 KRT16P08779 473 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 ABCD3P28288 659 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 NUDT2P50583 147 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 NRG3P56975 720 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 KRT72Q14CN4 511 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 RUNDC3AQ59EK9 446 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 LYPD8Q6UX82 237 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 TMEM156Q8N614 296 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 MIPOL1Q8TD10 442 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 TMBIM1Q969X1 311 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 SLC35A4Q96G79 324 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 ANKRD27Q96NW4 1050 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 CPPED1Q9BRF8 314 aaPredicted RBP19.56■□□□□ 0.72
VPS29-206ENST00000549578 PIGUQ9H490 435 aa19.56■□□□□ 0.72
VPS29-206ENST00000549578 NBEAQ8NFP9 2946 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 TTC36A6NLP5 189 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 OR12D1P0DN82 309 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 KHKP50053 298 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 PLCXD2Q0VAA5 305 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 SELPLGQ14242 412 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 IGFL2Q6UWQ7 119 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 SLC15A4Q8N697 577 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 COX18Q8N8Q8 333 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 OR52N2Q8NGI0 321 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 RAB8BQ92930 207 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 OMA1Q96E52 524 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 RMND5BQ96G75 393 aaPredicted RBP19.55■□□□□ 0.72
VPS29-206ENST00000549578 STACQ99469 402 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 EFCAB1Q9HAE3 211 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 DUSP22Q9NRW4 184 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 GID8Q9NWU2 228 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 CBLCQ9ULV8 474 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 TP53TG5Q9Y2B4 290 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 NPFFR2Q9Y5X5 522 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 CACNA1BQ00975 2339 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 PIEZO2Q9H5I5 2752 aa19.55■□□□□ 0.72
VPS29-206ENST00000549578 ETFAP13804 333 aa19.54■□□□□ 0.72
VPS29-206ENST00000549578 TRHRP34981 398 aaPredicted RBP19.54■□□□□ 0.72
VPS29-206ENST00000549578 CD96P40200 585 aa19.54■□□□□ 0.72
VPS29-206ENST00000549578 CRATP43155 626 aa19.54■□□□□ 0.72
VPS29-206ENST00000549578 RFX3P48380 749 aa19.54■□□□□ 0.72
VPS29-206ENST00000549578 MTPNP58546 118 aa19.54■□□□□ 0.72
VPS29-206ENST00000549578 OC90Q02509 493 aaPredicted RBP19.54■□□□□ 0.72
VPS29-206ENST00000549578 TUBA3CQ13748 450 aa19.54■□□□□ 0.72
VPS29-206ENST00000549578 TUBA3EQ6PEY2 450 aa19.54■□□□□ 0.72
VPS29-206ENST00000549578 OPN5Q6U736 354 aa19.54■□□□□ 0.72
VPS29-206ENST00000549578 IL20RBQ6UXL0 311 aa19.54■□□□□ 0.72
VPS29-206ENST00000549578 GALNT10Q86SR1 603 aa19.54■□□□□ 0.72
VPS29-206ENST00000549578 SLC34A3Q8N130 599 aa19.54■□□□□ 0.72
VPS29-206ENST00000549578 C10orf111Q8N326 155 aa19.54■□□□□ 0.72
VPS29-206ENST00000549578 UTP23Q9BRU9 249 aaKnown RBP19.54■□□□□ 0.72
VPS29-206ENST00000549578 CSAG2Q9Y5P2 127 aa19.54■□□□□ 0.72
VPS29-206ENST00000549578 BOD1L1Q8NFC6 3051 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 A8MVJ9 347 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 HMGN4O00479 90 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 NPPAP01160 153 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 FBXO45P0C2W1 286 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 PPIBP23284 216 aaKnown RBP19.53■□□□□ 0.72
VPS29-206ENST00000549578 CD97P48960 835 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 HLCSP50747 726 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 ARG2P78540 354 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 MRPS22P82650 360 aaKnown RBP19.53■□□□□ 0.72
VPS29-206ENST00000549578 ART3Q13508 389 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 RGNQ15493 299 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 CYP27C1Q4G0S4 372 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms