RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 GPR18Q14330 331 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 NIPAL1Q6NVV3 410 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 C16orf62Q7Z3J2 963 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 LRRC25Q8N386 305 aaPredicted RBP17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 AMER2Q8N7J2 671 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 OR10G6Q8NH81 332 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 POLDIP3Q9BY77 421 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 PLA2G12AQ9BZM1 189 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 C6orf62Q9GZU0 229 aaPredicted RBP17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 SEMA4GQ9NTN9 838 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 ANKMY1Q9P2S6 941 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 LOC105369274A0A096LPK9 316 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 LOC102723532A0A0G2JNH3 316 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 GSAPA4D1B5 854 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 OR6C74A6NCV1 312 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 CPSF4LA6NMK7 179 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 CYP7B1O75881 506 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 TRHRP34981 398 aaPredicted RBP17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 SIM1P81133 766 aaPredicted RBP17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 EFNB1P98172 346 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 RAB30Q15771 203 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 ATAD3BQ5T9A4 648 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 FIGLAQ6QHK4 219 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 PRICKLE2Q7Z3G6 844 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 OR4N4Q8N0Y3 316 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 SHISA5Q8N114 240 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 SLC34A3Q8N130 599 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 FAM26EQ8N5C1 309 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 ADAMTS15Q8TE58 950 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 PATE1Q8WXA2 126 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 FGF11Q92914 225 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 SERINC2Q96SA4 455 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 EGLN3Q9H6Z9 239 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 HHATLQ9HCP6 504 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 ACTR10Q9NZ32 417 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 CCDC59Q9P031 241 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 NTMQ9P121 344 aa17.36■□□□□ 0.37
PRPF40B-208ENST00000548436 TNFRSF10CO14798 259 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 KIAA0513O60268 411 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 SOX18P35713 384 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 PPP5CP53041 499 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 HOXC5Q00444 222 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 SUZ12Q15022 739 aaKnown RBP17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 SYT14P1Q58G82 188 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 HEPHL1Q6MZM0 1159 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 MFSD12Q6NUT3 480 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 CYP4Z2PQ8N1L4 340 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 RPLP0P6Q8NHW5 317 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 DIO2Q92813 273 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 CDS1Q92903 461 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 CALML5Q9NZT1 146 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 PILRAQ9UKJ1 303 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 MKLN1Q9UL63 735 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 NTNG1Q9Y2I2 539 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 A3GALT2U3KPV4 340 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 BRWD1Q9NSI6 2320 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 GPX5O75715 221 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 SCG5P05408 212 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 DRD1P21728 446 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 SOX3P41225 446 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 AVPR1BP47901 424 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 MRPS21P82921 87 aaKnown RBP17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 PAQR6Q6TCH4 344 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 OR4K14Q8NGD5 310 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 OR52P1PQ8NH57 321 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 PHF11Q9UIL8 331 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 SLC13A4Q9UKG4 626 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 DAPP1Q9UN19 280 aa17.35■□□□□ 0.37
PRPF40B-208ENST00000548436 AGAP5A6NIR3 686 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 BOLA2-SMG1P6H3BVE0 249 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 TGM1P22735 817 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 CD40LGP29965 261 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 SPHARQ15513 63 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 FAM214AQ32MH5 1076 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 SLC25A30Q5SVS4 291 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 CDC73Q6P1J9 531 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 FRRS1Q6ZNA5 592 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 SFTPA2Q8IWL1 248 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 TMEFF1Q8IYR6 380 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 NANOGP1Q8N7R0 232 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 SLC9A6Q92581 669 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 LRR1Q96L50 414 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 ZNF582Q96NG8 517 aaPredicted RBP17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 MS4A4EQ96PG1 132 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 TRNAU1APQ9NX07 287 aaKnown RBP17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 CLDND1Q9NY35 253 aa17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 MRPS2Q9Y399 296 aaKnown RBP17.34■□□□□ 0.37
PRPF40B-208ENST00000548436 ZNF860A6NHJ4 632 aa17.33■□□□□ 0.37
PRPF40B-208ENST00000548436 FAM170BA6NMN3 283 aa17.33■□□□□ 0.37
PRPF40B-208ENST00000548436 B3GALT2O43825 422 aa17.33■□□□□ 0.37
PRPF40B-208ENST00000548436 HBQ1P09105 142 aa17.33■□□□□ 0.37
PRPF40B-208ENST00000548436 GSTM3P21266 225 aa17.33■□□□□ 0.37
PRPF40B-208ENST00000548436 PRKAR1BP31321 381 aa17.33■□□□□ 0.37
PRPF40B-208ENST00000548436 LSSP48449 732 aa17.33■□□□□ 0.37
PRPF40B-208ENST00000548436 MLLT1Q03111 559 aaPredicted RBP17.33■□□□□ 0.37
PRPF40B-208ENST00000548436 TRAM2Q15035 370 aa17.33■□□□□ 0.37
PRPF40B-208ENST00000548436 Q6ZSR6 202 aa17.33■□□□□ 0.37
PRPF40B-208ENST00000548436 OR2L13Q8N349 312 aa17.33■□□□□ 0.37
PRPF40B-208ENST00000548436 OR8D4Q8NGM9 314 aa17.33■□□□□ 0.37
PRPF40B-208ENST00000548436 DOK4Q8TEW6 326 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms