RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 GP1BAP07359 652 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 CYC1P08574 325 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 FOLR1P15328 257 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 IL7RP16871 459 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 PRKACGP22612 351 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 CSF2RBP32927 897 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 GABRA3P34903 492 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 IST1P53990 364 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 DCAF7P61962 342 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 ID2Q02363 134 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 COX10Q12887 443 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 ZNF155Q12901 538 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-215ENST00000547672 DGCR6Q14129 220 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 IL11RAQ14626 422 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 KCNAB1Q14722 419 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 ANGPT1Q15389 498 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 LIN52Q52LA3 116 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 DCST2Q5T1A1 773 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 MLIPQ5VWP3 458 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 RHBDD2Q6NTF9 364 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 TSPYL5Q86VY4 417 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-215ENST00000547672 ZNF619Q8N2I2 560 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 TMEM52Q8NDY8 209 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 TSPAN14Q8NG11 270 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 OR10G2Q8NGC3 310 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 IFI44Q8TCB0 444 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 CDS1Q92903 461 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 DAZLQ92904 295 aaKnown RBP12.54□□□□□ -0.4
PTCH1-215ENST00000547672 SLC35B4Q969S0 331 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 OTUB1Q96FW1 271 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-215ENST00000547672 CNDP2Q96KP4 475 aaKnown RBP12.54□□□□□ -0.4
PTCH1-215ENST00000547672 PTCHD1Q96NR3 888 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 NECAB3Q96P71 396 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-215ENST00000547672 NUDT22Q9BRQ3 303 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 COL25A1Q9BXS0 654 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-215ENST00000547672 HOXD1Q9GZZ0 328 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 Q9N2J8 555 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 PAPOLBQ9NRJ5 636 aaKnown RBP12.54□□□□□ -0.4
PTCH1-215ENST00000547672 AKAP7Q9P0M2 348 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-215ENST00000547672 HEMK1Q9Y5R4 338 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-215ENST00000547672 AK5Q9Y6K8 562 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 PI4KAP42356 2102 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 PRAMEF27A3QJZ7 478 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 A6NHS1 94 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 AGAP5A6NIR3 686 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 TMX2-CTNND1H3BSU7 103 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 DIRAS1O95057 198 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 LDOC1O95751 146 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-215ENST00000547672 CCNYL3P0C7X3 344 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 ACP2P11117 423 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 LCN1P31025 176 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 CSTF2P33240 577 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTCH1-215ENST00000547672 MAP3K8P41279 467 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 RPL5P46777 297 aaKnown RBP12.53□□□□□ -0.4
PTCH1-215ENST00000547672 GCGRP47871 477 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 DAPP51397 102 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 NR1H2P55055 460 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 OCA2Q04671 838 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 CHRNEQ04844 493 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 FUT7Q11130 342 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 ST3GAL3Q11203 375 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 KCNAB2Q13303 367 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 ZNF267Q14586 743 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-215ENST00000547672 PUM1Q14671 1186 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTCH1-215ENST00000547672 DUSP5Q16690 384 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 PROX2Q3B8N5 592 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 ZIK1Q3SY52 487 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-215ENST00000547672 ARHGAP40Q5TG30 622 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 RRM2BQ7LG56 351 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 TMEM179BQ7Z7N9 219 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 ZNF605Q86T29 641 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 RANBP3LQ86VV4 465 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-215ENST00000547672 OFCC1Q8IZS5 231 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 DEPDC4Q8N2C3 294 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 ZNF786Q8N393 782 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 GPR32P1Q8NGA4 272 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 OR52R1Q8NGF1 315 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 OR4C15Q8NGM1 316 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 APOBEC4Q8WW27 367 aaKnown RBP12.53□□□□□ -0.4
PTCH1-215ENST00000547672 DHRS1Q96LJ7 313 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 SLC46A1Q96NT5 459 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 GTPBP2Q9BX10 602 aaKnown RBP12.53□□□□□ -0.4
PTCH1-215ENST00000547672 TGIF2Q9GZN2 237 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 ZNF350Q9GZX5 532 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 NMNAT1Q9HAN9 279 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-215ENST00000547672 VCX3AQ9NNX9 186 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 KRCC1Q9NPI7 259 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-215ENST00000547672 C14orf105Q9NVL8 296 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 ACAD8Q9UKU7 415 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 CLCA3PQ9Y6N3 262 aa12.53□□□□□ -0.4
PTCH1-215ENST00000547672 LY6G6EA0A0G2JKS1 128 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 IGHV5-10-1A0A0J9YXX1 117 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 A0A1W2PS29 197 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 BCKDKO14874 412 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 FLRT2O43155 660 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 ADAP00813 363 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 CTSBP07858 339 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 ENDOUP21128 410 aaKnown RBP12.52□□□□□ -0.41
PTCH1-215ENST00000547672 S1PR1P21453 382 aa12.52□□□□□ -0.41
PTCH1-215ENST00000547672 TRHRP34981 398 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms