RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PRR22Q8IZ63 422 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 FBXW8Q8N3Y1 598 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 OR4A15Q8NGL6 344 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 SPPL2AQ8TCT8 520 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 TMBIM1Q969X1 311 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 MIB2Q96AX9 1013 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 GIMAP5Q96F15 307 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 SLC35A4Q96G79 324 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 CCDC115Q96NT0 180 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 ZNF317Q96PQ6 595 aaPredicted RBP15.47■□□□□ 0.07
CCDC38-203ENST00000546803 FAM173AQ9BQD7 235 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 RABEP2Q9H5N1 569 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 EQTNQ9NQ60 294 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 GIN1Q9NXP7 522 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 NTNG1Q9Y2I2 539 aa15.47■□□□□ 0.07
CCDC38-203ENST00000546803 CHCHD2Q9Y6H1 151 aaPredicted RBP15.47■□□□□ 0.07
CCDC38-203ENST00000546803 CPAMD8Q8IZJ3 1885 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 FAM234BA2RU67 622 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 OR6C70A6NIJ9 312 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 REM1O75628 298 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 NKX2-2O95096 273 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 HMGN2P05204 90 aaKnown RBP15.46■□□□□ 0.07
CCDC38-203ENST00000546803 PLA2G2AP14555 144 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 GABRA3P34903 492 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 MEOX1P50221 254 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 POLR2JP52435 117 aaKnown RBP15.46■□□□□ 0.07
CCDC38-203ENST00000546803 PNLIPRP2P54317 469 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 FOXK1P85037 733 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 GAB1Q13480 694 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 EFR3AQ14156 821 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 SQLEQ14534 574 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 DECR1Q16698 335 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 TMEM81Q6P7N7 255 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 GK5Q6ZS86 529 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 ANKRD46Q86W74 232 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 ZFP62Q8NB50 900 aaPredicted RBP15.46■□□□□ 0.07
CCDC38-203ENST00000546803 OR2M7Q8NG81 312 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 OR5M3Q8NGP4 307 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 GOT1L1Q8NHS2 421 aaPredicted RBP15.46■□□□□ 0.07
CCDC38-203ENST00000546803 NR4A3Q92570 626 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 FRMD6Q96NE9 622 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 COL21A1Q96P44 957 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 TRIM4Q9C037 500 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 RMND5AQ9H871 391 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 OLAHQ9NV23 265 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 CNOT11Q9UKZ1 510 aaKnown RBP15.46■□□□□ 0.07
CCDC38-203ENST00000546803 CBLCQ9ULV8 474 aa15.46■□□□□ 0.07
CCDC38-203ENST00000546803 FAF1Q9UNN5 650 aaPredicted RBP15.46■□□□□ 0.07
CCDC38-203ENST00000546803 C9JVG2 144 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 TSPAN2O60636 221 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 KCNH1O95259 989 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 CPSF4O95639 269 aaKnown RBP15.45■□□□□ 0.06
CCDC38-203ENST00000546803 ALOX5P09917 674 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 UQCRC2P22695 453 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 IL12BP29460 328 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 SOAT1P35610 550 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 PSMD4P55036 377 aaKnown RBP15.45■□□□□ 0.06
CCDC38-203ENST00000546803 GPR85P60893 370 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 PMP22Q01453 160 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 TP53BP2Q13625 1128 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 LASP1Q14847 261 aaKnown RBP15.45■□□□□ 0.06
CCDC38-203ENST00000546803 EXOSC6Q5RKV6 272 aaKnown RBP15.45■□□□□ 0.06
CCDC38-203ENST00000546803 ZNF324BQ6AW86 544 aaPredicted RBP15.45■□□□□ 0.06
CCDC38-203ENST00000546803 CDC73Q6P1J9 531 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 ATCAYQ86WG3 371 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 CPSF7Q8N684 471 aaKnown RBP15.45■□□□□ 0.06
CCDC38-203ENST00000546803 TRIML2Q8N7C3 387 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 OR4N2Q8NGD1 307 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 OR9I1Q8NGQ6 314 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 GPR151Q8TDV0 419 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 SLC9A6Q92581 669 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 DIO2Q92813 273 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 HGDQ93099 445 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 TMCO6Q96DC7 493 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 PANX1Q96RD7 426 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 STACQ99469 402 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 TMEM120AQ9BXJ8 343 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 ACTRT3Q9BYD9 372 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 DUSP22Q9NRW4 184 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 DEPPQ9NTK1 212 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 MRGBPQ9NV56 204 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 GPATCH2Q9NW75 528 aa15.45■□□□□ 0.06
CCDC38-203ENST00000546803 RNF103-CHMP3A0A140T963 221 aa15.44■□□□□ 0.06
CCDC38-203ENST00000546803 J3QKU1 62 aa15.44■□□□□ 0.06
CCDC38-203ENST00000546803 UGT2B11O75310 529 aa15.44■□□□□ 0.06
CCDC38-203ENST00000546803 SNX4O95219 450 aa15.44■□□□□ 0.06
CCDC38-203ENST00000546803 ACP2P11117 423 aa15.44■□□□□ 0.06
CCDC38-203ENST00000546803 NCF2P19878 526 aaPredicted RBP15.44■□□□□ 0.06
CCDC38-203ENST00000546803 PIGAP37287 484 aa15.44■□□□□ 0.06
CCDC38-203ENST00000546803 ZFP36L2P47974 494 aaKnown RBP15.44■□□□□ 0.06
CCDC38-203ENST00000546803 ARFIP2P53365 341 aa15.44■□□□□ 0.06
CCDC38-203ENST00000546803 ALDH6A1Q02252 535 aaKnown RBP15.44■□□□□ 0.06
CCDC38-203ENST00000546803 CGB2Q6NT52 195 aa15.44■□□□□ 0.06
CCDC38-203ENST00000546803 C6orf120Q7Z4R8 191 aa15.44■□□□□ 0.06
CCDC38-203ENST00000546803 WDR53Q7Z5U6 358 aaPredicted RBP15.44■□□□□ 0.06
CCDC38-203ENST00000546803 SLC16A11Q8NCK7 471 aa15.44■□□□□ 0.06
CCDC38-203ENST00000546803 GALNT11Q8NCW6 608 aa15.44■□□□□ 0.06
CCDC38-203ENST00000546803 CHMP6Q96FZ7 201 aa15.44■□□□□ 0.06
CCDC38-203ENST00000546803 C16orf58Q96GQ5 468 aa15.44■□□□□ 0.06
CCDC38-203ENST00000546803 ADOQ96SZ5 270 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms