RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 EPHA8P29322 1005 aaPredicted RBP12.76□□□□□ -0.37
HCFC2-202ENST00000544223 GABRA3P34903 492 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 RELAQ04206 551 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 NPRL3Q12980 569 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF267Q14586 743 aaPredicted RBP12.76□□□□□ -0.37
HCFC2-202ENST00000544223 FAM214AQ32MH5 1076 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 MINDY4Q4G0A6 757 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 FAM69BQ5VUD6 431 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 CDC73Q6P1J9 531 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 LAPTM4BQ86VI4 370 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 CACTIN-AS1Q8N1I8 211 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 TSLPQ969D9 159 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 NMD3Q96D46 503 aaKnown RBP12.76□□□□□ -0.37
HCFC2-202ENST00000544223 MRPS26Q9BYN8 205 aaKnown RBP12.76□□□□□ -0.37
HCFC2-202ENST00000544223 CXorf56Q9H5V9 222 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 LIN28AQ9H9Z2 209 aaKnown RBP12.76□□□□□ -0.37
HCFC2-202ENST00000544223 GMEB2Q9UKD1 530 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 A4GNTQ9UNA3 340 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 GMPPBQ9Y5P6 360 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 CACNA1HO95180 2353 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 SRPX2O60687 465 aaPredicted RBP12.75□□□□□ -0.37
HCFC2-202ENST00000544223 DNAJB5O75953 348 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 IFNA16P05015 189 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 PRG2P13727 222 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 GNSP15586 552 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 IDH2P48735 452 aaKnown RBP12.75□□□□□ -0.37
HCFC2-202ENST00000544223 RAD23AP54725 363 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF691Q5VV52 312 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 FAAH2Q6GMR7 532 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 TYW3Q6IPR3 259 aaKnown RBP12.75□□□□□ -0.37
HCFC2-202ENST00000544223 PARP8Q8N3A8 854 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF614Q8N883 585 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 GABARAPL1Q9H0R8 117 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 ZSCAN32Q9NX65 697 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 EP300Q09472 2414 aaPredicted RBP12.75□□□□□ -0.37
HCFC2-202ENST00000544223 A0A1W2PQM1 296 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 DUX1O43812 170 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 TIAF1O95411 115 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 RNH1P13489 461 aaKnown RBP12.75□□□□□ -0.37
HCFC2-202ENST00000544223 RHCEP18577 417 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 HSD11B2P80365 405 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 KCNC4Q03721 635 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF155Q12901 538 aaPredicted RBP12.75□□□□□ -0.37
HCFC2-202ENST00000544223 TTC23Q5W5X9 447 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 KRT73Q86Y46 540 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 VWA5B2Q8N398 1253 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 OR52P1PQ8NH57 321 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 SAP25Q8TEE9 199 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 GAB3Q8WWW8 586 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 RIT1Q92963 219 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 MYCBPQ99417 103 aaPredicted RBP12.75□□□□□ -0.37
HCFC2-202ENST00000544223 SDF2Q99470 211 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 GPA33Q99795 319 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 UCK1Q9HA47 277 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 CUTCQ9NTM9 273 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 C19orf53Q9UNZ5 99 aaPredicted RBP12.75□□□□□ -0.37
HCFC2-202ENST00000544223 ERVK-19Q9WJR5 959 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 WDR45Q9Y484 360 aa12.75□□□□□ -0.37
HCFC2-202ENST00000544223 H3BMH7 237 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF749O43361 778 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 OR10H3O60404 316 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 ALPPP05187 535 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 HTR1AP08908 422 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 PABPC4LP0CB38 370 aaKnown RBP12.74□□□□□ -0.37
HCFC2-202ENST00000544223 S1PR1P21453 382 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 ELAVL4P26378 380 aaKnown RBP12.74□□□□□ -0.37
HCFC2-202ENST00000544223 RPL5P46777 297 aaKnown RBP12.74□□□□□ -0.37
HCFC2-202ENST00000544223 LIMS1P48059 325 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 MANEAQ5SRI9 462 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 ATAD3BQ5T9A4 648 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 DESI1Q6ICB0 168 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 COX18Q8N8Q8 333 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 SLC38A9Q8NBW4 561 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 MIPOL1Q8TD10 442 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 EDAQ92838 391 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 TANKQ92844 425 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 RBM18Q96H35 190 aaKnown RBP12.74□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF347Q96SE7 839 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 CXorf21Q9HAI6 301 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 PRMT8Q9NR22 394 aaPredicted RBP12.74□□□□□ -0.37
HCFC2-202ENST00000544223 PRTFDC1Q9NRG1 225 aa12.74□□□□□ -0.37
HCFC2-202ENST00000544223 TMX2-CTNND1H3BSU7 103 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 LGI1O95970 557 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 IGKV1D-16P01601 117 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 PEX19P40855 299 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 NUDT6P53370 316 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 CCL7P80098 99 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 HPCAP84074 193 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 CDK5R2Q13319 367 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 PMS2P3Q13401 168 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 C6orf141Q5SZD1 244 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 C8orf4Q9NR00 106 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 PAPOLBQ9NRJ5 636 aaKnown RBP12.73□□□□□ -0.37
HCFC2-202ENST00000544223 PNO1Q9NRX1 252 aaKnown RBP12.73□□□□□ -0.37
HCFC2-202ENST00000544223 MAN2C1Q9NTJ4 1040 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 SYNDIG1LA6NDD5 238 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 CCNB2O95067 398 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 NSA2O95478 260 aaKnown RBP12.73□□□□□ -0.37
HCFC2-202ENST00000544223 RPLP0P05388 317 aaKnown RBP12.73□□□□□ -0.37
HCFC2-202ENST00000544223 ITGA2P17301 1181 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms