RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 NTNG2Q96CW9 530 aa21.3■■□□□ 1
CHFR-222ENST00000544093 PGM2Q96G03 612 aa21.3■■□□□ 1
CHFR-222ENST00000544093 EGLN2Q96KS0 407 aa21.3■■□□□ 1
CHFR-222ENST00000544093 OSBPL11Q9BXB4 747 aa21.3■■□□□ 1
CHFR-222ENST00000544093 CENPHQ9H3R5 247 aa21.3■■□□□ 1
CHFR-222ENST00000544093 GLIPR2Q9H4G4 154 aa21.3■■□□□ 1
CHFR-222ENST00000544093 PNPLA3Q9NST1 481 aa21.3■■□□□ 1
CHFR-222ENST00000544093 KLRF1Q9NZS2 232 aa21.3■■□□□ 1
CHFR-222ENST00000544093 C15orf41Q9Y2V0 281 aa21.3■■□□□ 1
CHFR-222ENST00000544093 CACNA1CQ13936 2221 aa21.3■■□□□ 1
CHFR-222ENST00000544093 ITPR2Q14571 2701 aa21.3■■□□□ 1
CHFR-222ENST00000544093 NCKAP5O14513 1909 aa21.29■■□□□ 1
CHFR-222ENST00000544093 TTC36A6NLP5 189 aa21.29■■□□□ 1
CHFR-222ENST00000544093 TMEM233B4DJY2 109 aa21.29■■□□□ 1
CHFR-222ENST00000544093 PDPK1O15530 556 aa21.29■■□□□ 1
CHFR-222ENST00000544093 UGT2B11O75310 529 aa21.29■■□□□ 1
CHFR-222ENST00000544093 ERLIN1O75477 346 aa21.29■■□□□ 1
CHFR-222ENST00000544093 REM1O75628 298 aa21.29■■□□□ 1
CHFR-222ENST00000544093 ZWINTO95229 277 aa21.29■■□□□ 1
CHFR-222ENST00000544093 HPNP05981 417 aa21.29■■□□□ 1
CHFR-222ENST00000544093 GABRA1P14867 456 aa21.29■■□□□ 1
CHFR-222ENST00000544093 IL12BP29460 328 aa21.29■■□□□ 1
CHFR-222ENST00000544093 PTGER4P35408 488 aa21.29■■□□□ 1
CHFR-222ENST00000544093 MC3RP41968 323 aa21.29■■□□□ 1
CHFR-222ENST00000544093 ZNHIT3Q15649 155 aaPredicted RBP21.29■■□□□ 1
CHFR-222ENST00000544093 XKR7Q5GH72 579 aa21.29■■□□□ 1
CHFR-222ENST00000544093 BICRALQ6AI39 1079 aa21.29■■□□□ 1
CHFR-222ENST00000544093 TIGD3Q6B0B8 471 aa21.29■■□□□ 1
CHFR-222ENST00000544093 TMEM107Q6UX40 140 aa21.29■■□□□ 1
CHFR-222ENST00000544093 EXOC3L1Q86VI1 746 aa21.29■■□□□ 1
CHFR-222ENST00000544093 OR1J4Q8NGS1 313 aa21.29■■□□□ 1
CHFR-222ENST00000544093 ELP4Q96EB1 424 aa21.29■■□□□ 1
CHFR-222ENST00000544093 ZBED6CLQ96FA7 236 aaPredicted RBP21.29■■□□□ 1
CHFR-222ENST00000544093 ZIM3Q96PE6 472 aa21.29■■□□□ 1
CHFR-222ENST00000544093 UBQLN3Q9H347 655 aa21.29■■□□□ 1
CHFR-222ENST00000544093 ANKRA2Q9H9E1 313 aa21.29■■□□□ 1
CHFR-222ENST00000544093 OR10H1Q9Y4A9 318 aa21.29■■□□□ 1
CHFR-222ENST00000544093 PRAMEF25A6NGN4 478 aa21.28■■□□□ 1
CHFR-222ENST00000544093 FAM47E-STBD1D6RA91 191 aa21.28■■□□□ 1
CHFR-222ENST00000544093 CDK9P50750 372 aaKnown RBP21.28■■□□□ 1
CHFR-222ENST00000544093 PNLIPRP2P54317 469 aa21.28■■□□□ 1
CHFR-222ENST00000544093 CORO7P57737 925 aa21.28■■□□□ 1
CHFR-222ENST00000544093 ZNF155Q12901 538 aaPredicted RBP21.28■■□□□ 1
CHFR-222ENST00000544093 PDE7AQ13946 482 aa21.28■■□□□ 1
CHFR-222ENST00000544093 CYP27C1Q4G0S4 372 aa21.28■■□□□ 1
CHFR-222ENST00000544093 ATP6AP1LQ52LC2 224 aa21.28■■□□□ 1
CHFR-222ENST00000544093 TNFAIP8L3Q5GJ75 292 aa21.28■■□□□ 1
CHFR-222ENST00000544093 ZNF585AQ6P3V2 769 aa21.28■■□□□ 1
CHFR-222ENST00000544093 AGR3Q8TD06 166 aa21.28■■□□□ 1
CHFR-222ENST00000544093 SDCCAG3Q96C92 435 aa21.28■■□□□ 1
CHFR-222ENST00000544093 TSSK3Q96PN8 268 aa21.28■■□□□ 1
CHFR-222ENST00000544093 ACSS1Q9NUB1 689 aaPredicted RBP21.28■■□□□ 1
CHFR-222ENST00000544093 MRTO4Q9UKD2 239 aaKnown RBP21.28■■□□□ 1
CHFR-222ENST00000544093 HRH3Q9Y5N1 445 aa21.28■■□□□ 1
CHFR-222ENST00000544093 FREM3P0C091 2139 aa21.28■■□□□ 1
CHFR-222ENST00000544093 UPK1AO00322 258 aa21.27■■□□□ 1
CHFR-222ENST00000544093 ICOSLGO75144 302 aa21.27■■□□□ 1
CHFR-222ENST00000544093 TRAPPC6AO75865 159 aa21.27■■□□□ 1
CHFR-222ENST00000544093 PSMG1O95456 288 aa21.27■■□□□ 1
CHFR-222ENST00000544093 HSPA4LO95757 839 aa21.27■■□□□ 1
CHFR-222ENST00000544093 SERPINE1P05121 402 aa21.27■■□□□ 1
CHFR-222ENST00000544093 BCKDHAP12694 445 aa21.27■■□□□ 1
CHFR-222ENST00000544093 GRK2P25098 689 aa21.27■■□□□ 1
CHFR-222ENST00000544093 GPC1P35052 558 aa21.27■■□□□ 1
CHFR-222ENST00000544093 HPCAL1P37235 193 aa21.27■■□□□ 1
CHFR-222ENST00000544093 PRSS53Q2L4Q9 553 aa21.27■■□□□ 1
CHFR-222ENST00000544093 FNDC7Q5VTL7 733 aa21.27■■□□□ 1
CHFR-222ENST00000544093 B3GNT6Q6ZMB0 384 aa21.27■■□□□ 1
CHFR-222ENST00000544093 LARP4Q71RC2 724 aaKnown RBP eCLIP21.27■■□□□ 1
CHFR-222ENST00000544093 SLC44A2Q8IWA5 706 aaPredicted RBP21.27■■□□□ 1
CHFR-222ENST00000544093 GFM2Q969S9 779 aaKnown RBP21.27■■□□□ 1
CHFR-222ENST00000544093 GNRHR2Q96P88 292 aa21.27■■□□□ 1
CHFR-222ENST00000544093 NODALQ96S42 347 aa21.27■■□□□ 1
CHFR-222ENST00000544093 ADOQ96SZ5 270 aa21.27■■□□□ 1
CHFR-222ENST00000544093 Q9N2J8 555 aa21.27■■□□□ 1
CHFR-222ENST00000544093 ZDHHC2Q9UIJ5 367 aa21.27■■□□□ 1
CHFR-222ENST00000544093 SNPHO15079 494 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 TSPAN2O60636 221 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 LYPLA1O75608 230 aaPredicted RBP21.26■□□□□ 0.99
CHFR-222ENST00000544093 ENDOUP21128 410 aaKnown RBP21.26■□□□□ 0.99
CHFR-222ENST00000544093 CHRNB4P30926 498 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 GCKP35557 465 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 PSMD4P55036 377 aaKnown RBP21.26■□□□□ 0.99
CHFR-222ENST00000544093 PSG6Q00889 435 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 SF3B4Q15427 424 aaKnown RBP eCLIP21.26■□□□□ 0.994e-6■■■■■ 27.2
CHFR-222ENST00000544093 ANGPTL8Q6UXH0 198 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 NPSR1Q6W5P4 371 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 MARVELD2Q8N4S9 558 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 NATD1Q8N6N6 113 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 OR5M9Q8NGP3 310 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 MARVELD3Q96A59 401 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 SLC6A15Q9H2J7 730 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 C3orf14Q9HBI5 128 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 SH3BP4Q9P0V3 963 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 SPRR3Q9UBC9 169 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 TEX15Q9BXT5 2789 aa21.26■□□□□ 0.99
CHFR-222ENST00000544093 C15orf38-AP3S2A0A0A6YYH1 394 aa21.25■□□□□ 0.99
CHFR-222ENST00000544093 AKAP10O43572 662 aa21.25■□□□□ 0.99
CHFR-222ENST00000544093 CBR3O75828 277 aa21.25■□□□□ 0.99
CHFR-222ENST00000544093 DHRS4L1P0CG22 281 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms