RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 JADE3Q92613 823 aa12.57□□□□□ -0.4
SP140-213ENST00000543928 HOXB13Q92826 284 aaPredicted RBP12.57□□□□□ -0.4
SP140-213ENST00000543928 SPACA9Q96E40 222 aaPredicted RBP12.57□□□□□ -0.4
SP140-213ENST00000543928 OTUB1Q96FW1 271 aaPredicted RBP12.57□□□□□ -0.4
SP140-213ENST00000543928 SLC35G5Q96KT7 338 aa12.57□□□□□ -0.4
SP140-213ENST00000543928 SIGLEC12Q96PQ1 595 aa12.57□□□□□ -0.4
SP140-213ENST00000543928 ACTRT3Q9BYD9 372 aa12.57□□□□□ -0.4
SP140-213ENST00000543928 OCEL1Q9H607 264 aa12.57□□□□□ -0.4
SP140-213ENST00000543928 TRIM45Q9H8W5 580 aaPredicted RBP12.57□□□□□ -0.4
SP140-213ENST00000543928 SLC6A13Q9NSD5 602 aa12.57□□□□□ -0.4
SP140-213ENST00000543928 HPF1Q9NWY4 346 aa12.57□□□□□ -0.4
SP140-213ENST00000543928 LEF1Q9UJU2 399 aaPredicted RBP12.57□□□□□ -0.4
SP140-213ENST00000543928 FAF1Q9UNN5 650 aaPredicted RBP12.57□□□□□ -0.4
SP140-213ENST00000543928 NDUFAF1Q9Y375 327 aa12.57□□□□□ -0.4
SP140-213ENST00000543928 OR10H1Q9Y4A9 318 aa12.57□□□□□ -0.4
SP140-213ENST00000543928 NPFFR2Q9Y5X5 522 aa12.57□□□□□ -0.4
SP140-213ENST00000543928 A0A096LPI6 279 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 NEURL1O76050 574 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 NKX2-2O95096 273 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 C1QCP02747 245 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 ALOX5P09917 674 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 ZCCHC18P0CG32 403 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 MAP3K8P41279 467 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 CASP9P55211 416 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 RPS26P62854 115 aaKnown RBP12.56□□□□□ -0.4
SP140-213ENST00000543928 PSPHP78330 225 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 PLCXD2Q0VAA5 305 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 MAPRE2Q15555 327 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 DUSP5Q16690 384 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 GTDC1Q4AE62 458 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 NADK2Q4G0N4 442 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 EXOSC6Q5RKV6 272 aaKnown RBP12.56□□□□□ -0.4
SP140-213ENST00000543928 CDC73Q6P1J9 531 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 ANGPTL8Q6UXH0 198 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 Q6ZS92 163 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 ZNF227Q86WZ6 799 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 SNX32Q86XE0 403 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 PTRH1Q86Y79 214 aaKnown RBP12.56□□□□□ -0.4
SP140-213ENST00000543928 HORMAD2Q8N7B1 307 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 TEX19Q8NA77 164 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 MDS2Q8NDY4 140 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 PIK3R3Q92569 461 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 TMBIM1Q969X1 311 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 OMA1Q96E52 524 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 NEURL3Q96EH8 262 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 BBC3Q96PG8 261 aaPredicted RBP12.56□□□□□ -0.4
SP140-213ENST00000543928 CCDC106Q9BWC9 280 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 PAIP1Q9H074 479 aaKnown RBP12.56□□□□□ -0.4
SP140-213ENST00000543928 MYLK2Q9H1R3 596 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 SERHL2Q9H4I8 314 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 Q9N2J8 555 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 PCDHB14Q9Y5E9 798 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 BSNQ9UPA5 3926 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 BOD1L1Q8NFC6 3051 aa12.56□□□□□ -0.4
SP140-213ENST00000543928 TRAV17A0A0B4J275 112 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 LOC100653049A0A140TA62 436 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 GXYLT2A0PJZ3 443 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 CAPN14A8MX76 684 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 PPM1BO75688 479 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 SLC25A12O75746 678 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 KRT34O76011 436 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 KCNH1O95259 989 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 KRT75O95678 551 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 KRT16P08779 473 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 NAGAP17050 411 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 MATN1P21941 496 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 MAN2A2P49641 1150 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 TMED10P49755 219 aaKnown RBP12.55□□□□□ -0.4
SP140-213ENST00000543928 FBXW4P57775 412 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 KLRB1Q12918 225 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 ZNF169Q14929 603 aaPredicted RBP12.55□□□□□ -0.4
SP140-213ENST00000543928 NTRK2Q16620 822 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 ZNF791Q3KP31 576 aaPredicted RBP12.55□□□□□ -0.4
SP140-213ENST00000543928 CYP27C1Q4G0S4 372 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 LRIF1Q5T3J3 769 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 SLC6A19Q695T7 634 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 RTL4Q6ZR62 310 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 MDGA2Q7Z553 956 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 RETREG3Q86VR2 466 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 RNF130Q86XS8 419 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 TREML1Q86YW5 311 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 DND1Q8IYX4 353 aaKnown RBP12.55□□□□□ -0.4
SP140-213ENST00000543928 DPP10Q8N608 796 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 COX18Q8N8Q8 333 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 CCDC197Q8NCU1 140 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 FAM13CQ8NE31 585 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 OR5D16Q8NGK9 328 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 OR5M3Q8NGP4 307 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 PNPT1Q8TCS8 783 aaKnown RBP12.55□□□□□ -0.4
SP140-213ENST00000543928 ADAMTS15Q8TE58 950 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 ZFP90Q8TF47 636 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 CDS1Q92903 461 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 PNPLA2Q96AD5 504 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 TMEM125Q96AQ2 219 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 AURKBQ96GD4 344 aaPredicted RBP12.55□□□□□ -0.4
SP140-213ENST00000543928 SGCZQ96LD1 299 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 C5orf34Q96MH7 638 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 OR7D2Q96RA2 312 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 STACQ99469 402 aa12.55□□□□□ -0.4
SP140-213ENST00000543928 HES7Q9BYE0 225 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms