RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 BNIP3LO60238 219 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 CXCL2P19875 107 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 XPAP23025 273 aaPredicted RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 PTBP1P26599 531 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMG8-202ENST00000543872 ASMTP46597 345 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 AP1S2P56377 157 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 RAE1P78406 368 aaKnown RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 ZNF177Q13360 481 aaPredicted RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 IKZF1Q13422 519 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 ZNF630Q2M218 657 aaPredicted RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 OLIG3Q7RTU3 272 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 PRSS45Q7RTY3 260 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 IQCHQ86VS3 1027 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 OR5M3Q8NGP4 307 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 SPRYD4Q8WW59 207 aaPredicted RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 NARS2Q96I59 477 aaKnown RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 FBXO44Q9H4M3 255 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 CYSLTR2Q9NS75 346 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 CFAP97Q9P2B7 532 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 GLS2Q9UI32 602 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 KDELR3O43731 214 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 F11P03951 625 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 ACRV1P26436 265 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 MEOX2P50222 304 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 SNTB2Q13425 540 aaKnown RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 NAE1Q13564 534 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 KCNA10Q16322 511 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 MPEG1Q2M385 716 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 DUSP28Q4G0W2 176 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 IZUMO1Q8IYV9 350 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 OXR1Q8N573 874 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 CLRN3Q8NCR9 226 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 ADAMTS19Q8TE59 1207 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 ADAMTS14Q8WXS8 1223 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 PPCDCQ96CD2 204 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 WDR89Q96FK6 387 aaPredicted RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 POLDIP3Q9BY77 421 aaKnown RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 OR10A4Q9H209 315 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 COA4Q9NYJ1 87 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 ZSWIM8A7E2V4 1837 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 TMEM129A0AVI4 362 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 ANXA2P2A6NMY6 339 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 ZNF593O00488 134 aaPredicted RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 GAPDHSO14556 408 aaPredicted RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 MTX2O75431 263 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 LDOC1O95751 146 aaPredicted RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 ACP2P11117 423 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 SLC1A3P43003 542 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 RPS13P62277 151 aaKnown RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 BEX3Q00994 111 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 GGTA1PQ4G0N0 100 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 PDSS1Q5T2R2 415 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 PODNL1Q6PEZ8 512 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 Q6ZTK2 550 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 RRM2BQ7LG56 351 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 HS6ST3Q8IZP7 471 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 UXS1Q8NBZ7 420 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 DPYSL5Q9BPU6 564 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 PELOQ9BRX2 385 aaKnown RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 DPH7Q9BTV6 452 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 MGAT4CQ9UBM8 478 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 MLXQ9UH92 298 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 MBD1Q9UIS9 605 aaPredicted RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 GPR160Q9UJ42 338 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 EDARQ9UNE0 448 aa11.95□□□□□ -0.5
SMG8-202ENST00000543872 RPH3AQ9Y2J0 694 aaPredicted RBP11.95□□□□□ -0.5
SMG8-202ENST00000543872 ANKRD34CP0C6C1 535 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 SELLP14151 372 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 MMP11P24347 488 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 SGSHP51688 502 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 TAP2Q03519 686 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 MPP7Q5T2T1 576 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 LRRC28Q86X40 367 aaPredicted RBP11.94□□□□□ -0.5
SMG8-202ENST00000543872 ZNF454Q8N9F8 522 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 TEFMQ96QE5 360 aaKnown RBP11.94□□□□□ -0.5
SMG8-202ENST00000543872 GPA33Q99795 319 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 PLA2G12AQ9BZM1 189 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 ZNF768Q9H5H4 540 aaKnown RBP11.94□□□□□ -0.5
SMG8-202ENST00000543872 NANSQ9NR45 359 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 GULP1Q9UBP9 304 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 MTMR11A4FU01 709 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 ARHGEF33A8MVX0 844 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 M0R3H8 397 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 FAAHO00519 579 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 CASC3O15234 703 aaKnown RBP11.94□□□□□ -0.5
SMG8-202ENST00000543872 IRF1P10914 325 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 RPS12P25398 132 aaKnown RBP11.94□□□□□ -0.5
SMG8-202ENST00000543872 SLC36A2Q495M3 483 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 REEP3Q6NUK4 255 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 NCEH1Q6PIU2 408 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 ZER1Q7Z7L7 766 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 LMNTD1Q8N9Z9 388 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 GPR32P1Q8NGA4 272 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 OR4D11Q8NGI4 311 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 AHCYL2Q96HN2 611 aaKnown RBP11.94□□□□□ -0.5
SMG8-202ENST00000543872 SYT17Q9BSW7 474 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 IL20RAQ9UHF4 553 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 A0A1W2PPK0 400 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 MBLAC1A4D2B0 266 aaPredicted RBP11.94□□□□□ -0.5
SMG8-202ENST00000543872 RNASET2O00584 256 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms