RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 FHP07954 510 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 CCNYL3P0C7X3 344 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 EN2P19622 333 aaPredicted RBP12.91□□□□□ -0.34
VPS33A-208ENST00000543633 APEX1P27695 318 aaKnown RBP12.91□□□□□ -0.34
VPS33A-208ENST00000543633 IFNA8P32881 189 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 STAT5AP42229 794 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 CDH11P55287 796 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 RRAS2P62070 204 aaPredicted RBP12.91□□□□□ -0.34
VPS33A-208ENST00000543633 DEFB103AP81534 67 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 MAB21L1Q13394 359 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 ADAM15Q13444 863 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 TMEM35AQ53FP2 167 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 TYW3Q6IPR3 259 aaKnown RBP12.91□□□□□ -0.34
VPS33A-208ENST00000543633 LMNTD1Q8N9Z9 388 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 KREMEN2Q8NCW0 462 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 TOR1AIP2Q8NFQ8 470 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 NLGN4YQ8NFZ3 816 aaPredicted RBP12.91□□□□□ -0.34
VPS33A-208ENST00000543633 OR56A1Q8NGH5 318 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 OR5AR1Q8NGP9 310 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 OR5K2Q8NHB8 316 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 CXorf40AQ8TE69 158 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 SLC9A6Q92581 669 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 OSTF1Q92882 214 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 TM9SF2Q99805 663 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 PLA2G12AQ9BZM1 189 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 SLC35C2Q9NQQ7 365 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 TEX10Q9NXF1 929 aaPredicted RBP12.91□□□□□ -0.34
VPS33A-208ENST00000543633 COMMD3Q9UBI1 195 aa12.91□□□□□ -0.34
VPS33A-208ENST00000543633 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.91□□□□□ -0.34
VPS33A-208ENST00000543633 A0A087WUU8 490 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 KPNA3O00505 521 aaPredicted RBP12.9□□□□□ -0.34
VPS33A-208ENST00000543633 CHRM4P08173 479 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 PSKH1P11801 424 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 FPR3P25089 353 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 CCR2P41597 374 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 WSCD2Q2TBF2 565 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 TMEM52BQ4KMG9 183 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 AADACL4Q5VUY2 407 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 HACD4Q5VWC8 232 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 FAM46CQ5VWP2 391 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 BICRALQ6AI39 1079 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 TMCO2Q7Z6W1 182 aaPredicted RBP12.9□□□□□ -0.34
VPS33A-208ENST00000543633 MARCH9Q86YJ5 346 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 TRIM48Q8IWZ4 208 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 TMIEQ8NEW7 156 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 OR8D4Q8NGM9 314 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 PIGXQ8TBF5 258 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 SORCS1Q8WY21 1168 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 TFGQ92734 400 aaPredicted RBP12.9□□□□□ -0.34
VPS33A-208ENST00000543633 OTULINQ96BN8 352 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 PTPRSQ13332 1948 aa12.9□□□□□ -0.34
VPS33A-208ENST00000543633 GABRPO00591 440 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 SLC9A3R1O14745 358 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-208ENST00000543633 HPGDSO60760 199 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 C6P13671 934 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 MTNR1BP49286 362 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 TAS2R38P59533 333 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 TAS2R41P59536 307 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 ST8SIA6P61647 398 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 RIPPLY1Q0D2K3 151 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 FUT5Q11128 374 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 ST3GAL3Q11203 375 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 ZNF155Q12901 538 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-208ENST00000543633 IL18Q14116 193 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 OR4C11Q6IEV9 310 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 FAM180BQ6P0A1 224 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 RTL10Q7L3V2 364 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 UBE3DQ7Z6J8 389 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 OR5D16Q8NGK9 328 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 NEIL3Q8TAT5 605 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 MYLIPQ8WY64 445 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 DIO2Q92813 273 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 KCTD12Q96CX2 325 aaKnown RBP12.89□□□□□ -0.35
VPS33A-208ENST00000543633 KCNN2Q9H2S1 579 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 EGLN3Q9H6Z9 239 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 TRIM45Q9H8W5 580 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-208ENST00000543633 B3GAT2Q9NPZ5 323 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 CUEDC1Q9NWM3 386 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-208ENST00000543633 DNMT3AQ9Y6K1 912 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-208ENST00000543633 MUC22E2RYF6 1773 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-208ENST00000543633 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-208ENST00000543633 K7ESM1 405 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 SURF4O15260 269 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 ACRP10323 421 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 ARSBP15848 533 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 HK1P19367 917 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 CD53P19397 219 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 HTR1FP30939 366 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 SSTR4P31391 388 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 OMPP47874 163 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 INPP1P49441 399 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 ABATP80404 500 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 ANGPT1Q15389 498 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 DECR1Q16698 335 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 AMZ2Q86W34 360 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 AKAP1Q92667 903 aaKnown RBP eCLIP12.89□□□□□ -0.35
VPS33A-208ENST00000543633 UPRTQ96BW1 309 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 MED30Q96HR3 178 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 COX14Q96I36 57 aa12.89□□□□□ -0.35
VPS33A-208ENST00000543633 DPH7Q9BTV6 452 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms