RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 CT45A9P0DMV2 189 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 ITGAMP11215 1152 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 PPIBP23284 216 aaKnown RBP8.65□□□□□ -1.02
DDX55-208ENST00000541259 MSX2P35548 267 aaPredicted RBP8.65□□□□□ -1.02
DDX55-208ENST00000541259 PRIM2P49643 509 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 ST13P50502 369 aaKnown RBP8.65□□□□□ -1.02
DDX55-208ENST00000541259 PSG6Q00889 435 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 LIPEQ05469 1076 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 CHAF1BQ13112 559 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 CEACAM7Q14002 265 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 MYBPC3Q14896 1274 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 EBPQ15125 230 aaKnown RBP8.65□□□□□ -1.02
DDX55-208ENST00000541259 ADRM1Q16186 407 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 NNATQ16517 81 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 DUSP5Q16690 384 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 CT45A2Q5DJT8 189 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 PLAG1Q6DJT9 500 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 CDC73Q6P1J9 531 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 NPSR1Q6W5P4 371 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 BNC2Q6ZN30 1099 aaPredicted RBP8.65□□□□□ -1.02
DDX55-208ENST00000541259 ASRGL1Q7L266 308 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 YTHDF3Q7Z739 585 aaKnown RBP8.65□□□□□ -1.02
DDX55-208ENST00000541259 IFNEQ86WN2 208 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 CALHM3Q86XJ0 350 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 PTOV1Q86YD1 416 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 SPACA3Q8IXA5 215 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 FAM156AQ8NDB6 213 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 OR4N2Q8NGD1 307 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 M1APQ8TC57 530 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 MIPOL1Q8TD10 442 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 PIK3R3Q92569 461 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 SLC9A6Q92581 669 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 JADE3Q92613 823 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 HOXB13Q92826 284 aaPredicted RBP8.65□□□□□ -1.02
DDX55-208ENST00000541259 CDS1Q92903 461 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 MAL2Q969L2 176 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 ADIPOR1Q96A54 375 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 NACC2Q96BF6 587 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 VSTM2LQ96N03 204 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 GAL3ST4Q96RP7 486 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 LMF1Q96S06 567 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 CCNL2Q96S94 520 aaPredicted RBP8.65□□□□□ -1.02
DDX55-208ENST00000541259 ECSITQ9BQ95 431 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 THTPAQ9BU02 230 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 LMF2Q9BU23 707 aaKnown RBP8.65□□□□□ -1.02
DDX55-208ENST00000541259 DPH1Q9BZG8 443 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 WWTR1Q9GZV5 400 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 LRMDAQ9H2I8 198 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 MMP25Q9NPA2 562 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 SPAG4Q9NPE6 437 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 NDE1Q9NXR1 346 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 ABCD2Q9UBJ2 740 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 COPS7AQ9UBW8 275 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 CD300AQ9UGN4 299 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 FAF1Q9UNN5 650 aaPredicted RBP8.65□□□□□ -1.02
DDX55-208ENST00000541259 RAXQ9Y2V3 346 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 L3MBTL1Q9Y468 752 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.65□□□□□ -1.02
DDX55-208ENST00000541259 PTPRQQ9UMZ3 2332 aa8.65□□□□□ -1.03
DDX55-208ENST00000541259 ANKRD11Q6UB99 2663 aaPredicted RBP8.65□□□□□ -1.03
DDX55-208ENST00000541259 C15orf38-AP3S2A0A0A6YYH1 394 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 C2orf92A0A1B0GVN3 265 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 PRORSD1PA6NEY8 169 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 ARGFXA6NJG6 315 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 OR6C76A6NM76 312 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 ZNF891A8MT65 544 aaPredicted RBP8.64□□□□□ -1.03
DDX55-208ENST00000541259 ANKRD65E5RJM6 399 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 WWP2O00308 870 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 MAN1A2O60476 641 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 ZNF354AO60765 605 aaPredicted RBP8.64□□□□□ -1.03
DDX55-208ENST00000541259 DNAJC8O75937 253 aaPredicted RBP8.64□□□□□ -1.03
DDX55-208ENST00000541259 PDE5AO76074 875 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 NKX2-2O95096 273 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 ALOX5P09917 674 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 TCN1P20061 433 aaPredicted RBP8.64□□□□□ -1.03
DDX55-208ENST00000541259 ITPKBP27987 946 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 GABRA3P34903 492 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 GSK3BP49841 420 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 KHKP50053 298 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 RASSF2P50749 326 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 CLCN2P51788 898 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 NR0B1P51843 470 aaKnown RBP8.64□□□□□ -1.03
DDX55-208ENST00000541259 EEFSECP57772 596 aaKnown RBP8.64□□□□□ -1.03
DDX55-208ENST00000541259 DSTNP60981 165 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 FUT5Q11128 374 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 CDC20Q12834 499 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 FADDQ13158 208 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 MAPK11Q15759 364 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 EXT1Q16394 746 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 SYPL1Q16563 259 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 PIGGQ5H8A4 983 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 DCAF10Q5QP82 559 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 FCRLBQ6BAA4 426 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 ZCCHC12Q6PEW1 402 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 BHLHB9Q6PI77 547 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 HSDL2Q6YN16 418 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 SLC29A4Q7RTT9 530 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 ARPINQ7Z6K5 226 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 GALNT10Q86SR1 603 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 SLC44A2Q8IWA5 706 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms