RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, human

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-210	ENST00000540975	DBNDD1	Q9H9R9	158 aa		4.19	□□□□□ -1.74
YBX3-210	ENST00000540975	ADAM22	Q9P0K1	906 aa		4.19	□□□□□ -1.74
YBX3-210	ENST00000540975	ERVK-18	Q9QC07	812 aa		4.19	□□□□□ -1.74
YBX3-210	ENST00000540975	KDM5B	Q9UGL1	1544 aa		4.19	□□□□□ -1.74
YBX3-210	ENST00000540975	KIF27	Q86VH2	1401 aa		4.19	□□□□□ -1.74
YBX3-210	ENST00000540975	SCAPER	Q9BY12	1400 aa		4.19	□□□□□ -1.74
YBX3-210	ENST00000540975	NLRP1	Q9C000	1473 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	TOP2B	Q02880	1626 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	TRIM64	A6NGJ6	449 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	TRIM64B	A6NI03	449 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	SLC28A1	O00337	649 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	DYNC1I1	O14576	645 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	HDAC3	O15379	428 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	B3GALNT1	O75752	331 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	TSPY4	P0CV99	314 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	TSPY10	P0CW01	314 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	FER	P16591	822 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	KRTAP5-9	P26371	169 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	ATP5D	P30049	168 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	MAT2A	P31153	395 aa	Known RBP	4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	UCP2	P55851	309 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	ASAH1	Q13510	395 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	PDE7A	Q13946	482 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	SLC39A12	Q504Y0	691 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	TATDN1	Q6P1N9	297 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	ADAMTSL5	Q6ZMM2	481 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	CATSPER4	Q7RTX7	472 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	ATP6V1E2	Q96A05	226 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	ESM1	Q9NQ30	184 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	PLSCR3	Q9NRY6	295 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	EPS15L1	Q9UBC2	864 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	SLC9A8	Q9Y2E8	581 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	KIF3A	Q9Y496	699 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	PRDM2	Q13029	1718 aa		4.18	□□□□□ -1.74
YBX3-210	ENST00000540975	HMGXB3	Q12766	1538 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	NPIPA5	A0A0B4J1W7	369 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	NPIPA5	E9PKD4	350 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	EI24	O14681	340 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	PDE5A	O76074	875 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	SERPINF2	P08697	491 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	WNT2	P09544	360 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	SFTPC	P11686	197 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	ZNF24	P17028	368 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	IDS	P22304	550 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	KIAA1024L	P59773	190 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	HAND2	P61296	217 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	ZNF33B	Q06732	778 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	SMU1	Q2TAY7	513 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	GPAT3	Q53EU6	434 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	CCDC65	Q8IXS2	484 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	LPCAT1	Q8NF37	534 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	OR8H1	Q8NGG4	311 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	BRSK1	Q8TDC3	778 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	U2AF1L4	Q8WU68	220 aa	Known RBP	4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	P3H4	Q92791	437 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	SLCO4A1	Q96BD0	722 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	LINC00167	Q96N53	147 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	SLC5A7	Q9GZV3	580 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	FANCF	Q9NPI8	374 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	CENPM	Q9NSP4	180 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	CHMP5	Q9NZZ3	219 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	PRO0461	Q9UI25	63 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	PLEKHA6	Q9Y2H5	1048 aa		4.17	□□□□□ -1.74
YBX3-210	ENST00000540975	TMEM94	Q12767	1356 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	CCNB3	Q8WWL7	1395 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	CCDC144A	A2RUR9	1427 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	FHAD1	B1AJZ9	1412 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	CNTLN	Q9NXG0	1405 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	FRG2C	A6NGY1	282 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	EPOP	A6NHQ4	379 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975		G3V3Y1	287 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	EEF2K	O00418	725 aa	Known RBP	4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	FGFR1OP	O95684	399 aa	Known RBP	4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	MUT	P22033	750 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	KRT83	P78385	493 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	ZNF85	Q03923	595 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	C2orf83	Q53S99	150 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	SLC22A10	Q63ZE4	541 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	HIST2H2AA3	Q6FI13	130 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	IYD	Q6PHW0	289 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	B3GLCT	Q6Y288	498 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975		Q6ZVH6	145 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	APOBEC3F	Q8IUX4	373 aa	Known RBP	4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	UNC5CL	Q8IV45	518 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	C5orf30	Q96GV9	206 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	ACCS	Q96QU6	501 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	KLHDC2	Q9Y2U9	406 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	NOSIP	Q9Y314	301 aa	Known RBP	4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.16	□□□□□ -1.74
YBX3-210	ENST00000540975		V9GYY5	206 aa	Predicted RBP	4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	RAPGEF2	Q9Y4G8	1499 aa		4.16	□□□□□ -1.74
YBX3-210	ENST00000540975	BIVM-ERCC5	R4GMW8	1640 aa		4.15	□□□□□ -1.74
YBX3-210	ENST00000540975	RANBP6	O60518	1105 aa	Known RBP	4.15	□□□□□ -1.75
YBX3-210	ENST00000540975	HOXB7	P09629	217 aa		4.15	□□□□□ -1.75
YBX3-210	ENST00000540975	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.15	□□□□□ -1.75
YBX3-210	ENST00000540975	GZMA	P12544	262 aa		4.15	□□□□□ -1.75
YBX3-210	ENST00000540975	CTAG1A	P78358	180 aa		4.15	□□□□□ -1.75
YBX3-210	ENST00000540975	CD47	Q08722	323 aa		4.15	□□□□□ -1.75

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