RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 FJX1Q86VR8 437 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 RIMKLAQ8IXN7 391 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 SLC34A3Q8N130 599 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 FAM109AQ8N4B1 249 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 TMEM251Q8N6I4 163 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 CLEC18CQ8NCF0 446 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 OR4N2Q8NGD1 307 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 LRRC8CQ8TDW0 803 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 COQ8BQ96D53 544 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 RILPQ96NA2 401 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 COL21A1Q96P44 957 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 ADOQ96SZ5 270 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 SECISBP2Q96T21 854 aaKnown RBP8.47□□□□□ -1.05
SNHG1-215ENST00000540904 DUSP26Q9BV47 211 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 DPY30Q9C005 99 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 METTL7AQ9H8H3 244 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 C3orf14Q9HBI5 128 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 ZFP64Q9NPA5 681 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 INTS9Q9NV88 658 aaKnown RBP8.47□□□□□ -1.05
SNHG1-215ENST00000540904 ERRFI1Q9UJM3 462 aaPredicted RBP8.47□□□□□ -1.05
SNHG1-215ENST00000540904 SNX8Q9Y5X2 465 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 RELNP78509 3460 aa8.46□□□□□ -1.05
SNHG1-215ENST00000540904 TENM4Q6N022 2769 aa8.46□□□□□ -1.05
SNHG1-215ENST00000540904 BAHCC1Q9P281 2608 aa8.46□□□□□ -1.05
SNHG1-215ENST00000540904 A0A1B0GTH9 108 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 ANKRD33BA6NCL7 494 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 OR6C70A6NIJ9 312 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 LRRC3CA6NJW4 275 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 CFLARO15519 480 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 SNX4O95219 450 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 C6orf47O95873 294 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 CELA3AP09093 270 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 IFI6P09912 130 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 RFPL3SP0C7P2 107 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 ABOP16442 354 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 GABRA3P34903 492 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 PTGS2P35354 604 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 MASP1P48740 699 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 CASP6P55212 293 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 NME5P56597 212 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 C21orf58P58505 322 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 PSPHP78330 225 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 PRR5P85299 388 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 GAB1Q13480 694 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 MLC1Q15049 377 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.46□□□□□ -1.06
SNHG1-215ENST00000540904 LSM12Q3MHD2 195 aaKnown RBP8.46□□□□□ -1.06
SNHG1-215ENST00000540904 SPDYE7PQ495Y7 208 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 C4orf17Q53FE4 359 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 OGFOD2Q6N063 350 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 SPATA19Q7Z5L4 167 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 FGD2Q7Z6J4 655 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 PACS2Q86VP3 889 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 SPPL2CQ8IUH8 684 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 LRRC34Q8IZ02 419 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 NATD1Q8N6N6 113 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 NUP43Q8NFH3 380 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 CEP70Q8NHQ1 597 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 FBXO30Q8TB52 745 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 PIWIL2Q8TC59 973 aaKnown RBP8.46□□□□□ -1.06
SNHG1-215ENST00000540904 SSC4DQ8WTU2 575 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 OR5P2Q8WZ92 322 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 SLC9A6Q92581 669 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 JADE3Q92613 823 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 HGDQ93099 445 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 EFHD2Q96C19 240 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-215ENST00000540904 TMCO6Q96DC7 493 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 ZNF597Q96LX8 424 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 MS4A4EQ96PG1 132 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 NODALQ96S42 347 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 YIPF4Q9BSR8 244 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 ANGPTL4Q9BY76 406 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 BHLHE41Q9C0J9 482 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-215ENST00000540904 ACBD3Q9H3P7 528 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 ZNF703Q9H7S9 590 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-215ENST00000540904 ZDHHC11Q9H8X9 412 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 GALNT9Q9HCQ5 603 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 Q9N2J8 555 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 SLCO1B3Q9NPD5 702 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 SIRT3Q9NTG7 399 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-215ENST00000540904 ZCCHC3Q9NUD5 404 aaKnown RBP8.46□□□□□ -1.06
SNHG1-215ENST00000540904 ZNF446Q9NWS9 450 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 KLRF1Q9NZS2 232 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 TINAGQ9UJW2 476 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 CBLCQ9ULV8 474 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 MAPRE3Q9UPY8 281 aa8.46□□□□□ -1.06
SNHG1-215ENST00000540904 UBR5O95071 2799 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-215ENST00000540904 A0A1B0GUH1 482 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 GXYLT2A0PJZ3 443 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 PRAMEF25A6NGN4 478 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 CCL21O00585 134 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 ANKRD28O15084 1053 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 EMC8O43402 210 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 TSPAN2O60636 221 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 DIAPH2O60879 1101 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 ICOSLGO75144 302 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 TRIM3O75382 744 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-215ENST00000540904 ALDOCP09972 364 aaKnown RBP8.45□□□□□ -1.06
SNHG1-215ENST00000540904 RNF224P0DH78 156 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 GDF1P27539 372 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms