RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 TMEM81Q6P7N7 255 aa15.48■□□□□ 0.07
CD9-209ENST00000540891 LARP4Q71RC2 724 aaKnown RBP eCLIP15.48■□□□□ 0.07
CD9-209ENST00000540891 SLC44A2Q8IWA5 706 aaPredicted RBP15.48■□□□□ 0.07
CD9-209ENST00000540891 ZFP28Q8NHY6 868 aa15.48■□□□□ 0.07
CD9-209ENST00000540891 HOXB13Q92826 284 aaPredicted RBP15.48■□□□□ 0.07
CD9-209ENST00000540891 COQ8BQ96D53 544 aa15.48■□□□□ 0.07
CD9-209ENST00000540891 RILPQ96NA2 401 aa15.48■□□□□ 0.07
CD9-209ENST00000540891 LMF2Q9BU23 707 aaKnown RBP15.48■□□□□ 0.07
CD9-209ENST00000540891 MANSC1Q9H8J5 431 aa15.48■□□□□ 0.07
CD9-209ENST00000540891 ASH1LQ9NR48 2969 aaKnown RBP15.48■□□□□ 0.07
CD9-209ENST00000540891 SIRT3Q9NTG7 399 aaPredicted RBP15.48■□□□□ 0.07
CD9-209ENST00000540891 NOP53Q9NZM5 478 aaKnown RBP15.48■□□□□ 0.07
CD9-209ENST00000540891 NTMQ9P121 344 aa15.48■□□□□ 0.07
CD9-209ENST00000540891 SH3BGRL2Q9UJC5 107 aa15.48■□□□□ 0.07
CD9-209ENST00000540891 BOKQ9UMX3 212 aaPredicted RBP15.48■□□□□ 0.07
CD9-209ENST00000540891 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 OR6C70A6NIJ9 312 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 REM1O75628 298 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 SASH3O75995 380 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 SNX4O95219 450 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 PRPS1L1P21108 318 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 RPL3P39023 403 aaKnown RBP15.47■□□□□ 0.07
CD9-209ENST00000540891 MAP3K8P41279 467 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 ATG16L1Q676U5 607 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 TRILQ7L0X0 811 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 TRIM42Q8IWZ5 723 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 LRRC34Q8IZ02 419 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 GIMAP5Q96F15 307 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 COL21A1Q96P44 957 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 MARCOQ9UEW3 520 aaPredicted RBP15.47■□□□□ 0.07
CD9-209ENST00000540891 HRH3Q9Y5N1 445 aa15.47■□□□□ 0.07
CD9-209ENST00000540891 A0A1B0GVC2 190 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 CCL21O00585 134 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 KLF11O14901 512 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 ANKRD28O15084 1053 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 HDAC3O15379 428 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 KITP10721 976 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 ABOP16442 354 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 LBPP18428 481 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 ENDOUP21128 410 aaKnown RBP15.46■□□□□ 0.07
CD9-209ENST00000540891 PTGS2P35354 604 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 PSPHP78330 225 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 RPP38P78345 283 aaKnown RBP15.46■□□□□ 0.07
CD9-209ENST00000540891 GAB1Q13480 694 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 CPTPQ5TA50 214 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 ARHGAP11AQ6P4F7 1023 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 CAMKMTQ7Z624 323 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 DOLPP1Q86YN1 238 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 WDR75Q8IWA0 830 aaKnown RBP15.46■□□□□ 0.07
CD9-209ENST00000540891 FAM57AQ8TBR7 257 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 RNF138Q8WVD3 245 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 ZNF75CPQ92670 426 aaPredicted RBP15.46■□□□□ 0.07
CD9-209ENST00000540891 CCDC120Q96HB5 630 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 TMEM41AQ96HV5 264 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 ZNF597Q96LX8 424 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 JSRP1Q96MG2 331 aaPredicted RBP15.46■□□□□ 0.07
CD9-209ENST00000540891 PHF12Q96QT6 1004 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 ADOQ96SZ5 270 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 UBQLN3Q9H347 655 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 GALNT9Q9HCQ5 603 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 NCKAP5O14513 1909 aa15.46■□□□□ 0.07
CD9-209ENST00000540891 A0A1W2PRB8 838 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 C2orf72A6NCS6 295 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 ADAM10O14672 748 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 ZG16O60844 167 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 ABCB7O75027 752 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 ICOSLGO75144 302 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 ALDOCP09972 364 aaKnown RBP15.45■□□□□ 0.06
CD9-209ENST00000540891 DDX5P17844 614 aaKnown RBP15.45■□□□□ 0.06
CD9-209ENST00000540891 SLC10A1Q14973 349 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 EXOSC6Q5RKV6 272 aaKnown RBP15.45■□□□□ 0.06
CD9-209ENST00000540891 TMEM198Q66K66 360 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 OGFOD2Q6N063 350 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 SLC30A6Q6NXT4 461 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 MAVSQ7Z434 540 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 NUP43Q8NFH3 380 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 PSMA8Q8TAA3 256 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 OR5P2Q8WZ92 322 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 EFHD2Q96C19 240 aaPredicted RBP15.45■□□□□ 0.06
CD9-209ENST00000540891 FAM120BQ96EK7 910 aaKnown RBP15.45■□□□□ 0.06
CD9-209ENST00000540891 OSBPL11Q9BXB4 747 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 WDR55Q9H6Y2 383 aaPredicted RBP15.45■□□□□ 0.06
CD9-209ENST00000540891 METTL7AQ9H8H3 244 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 EQTNQ9NQ60 294 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 QPCTLQ9NXS2 382 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 CBLCQ9ULV8 474 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 OR10H1Q9Y4A9 318 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 NINQ8N4C6 2090 aa15.45■□□□□ 0.06
CD9-209ENST00000540891 PTPN13Q12923 2485 aa15.44■□□□□ 0.06
CD9-209ENST00000540891 GXYLT2A0PJZ3 443 aa15.44■□□□□ 0.06
CD9-209ENST00000540891 PRAMEF25A6NGN4 478 aa15.44■□□□□ 0.06
CD9-209ENST00000540891 ZNF195O14628 629 aa15.44■□□□□ 0.06
CD9-209ENST00000540891 SNPHO15079 494 aa15.44■□□□□ 0.06
CD9-209ENST00000540891 EMC8O43402 210 aa15.44■□□□□ 0.06
CD9-209ENST00000540891 CLDN1O95832 211 aa15.44■□□□□ 0.06
CD9-209ENST00000540891 C6orf47O95873 294 aa15.44■□□□□ 0.06
CD9-209ENST00000540891 ACP2P11117 423 aa15.44■□□□□ 0.06
CD9-209ENST00000540891 PTPN6P29350 595 aa15.44■□□□□ 0.06
CD9-209ENST00000540891 PNLIPRP2P54317 469 aa15.44■□□□□ 0.06
CD9-209ENST00000540891 PRKAG1P54619 331 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms