RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 FAM46CQ5VWP2 391 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 RASSF6Q6ZTQ3 369 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 SHFQ7M4L6 423 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 ZFP41Q8N8Y5 198 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 POGLUT1Q8NBL1 392 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 TP53I13Q8NBR0 393 aaPredicted RBP11.56□□□□□ -0.56
NPC1-202ENST00000540608 JPH3Q8WXH2 748 aaPredicted RBP11.56□□□□□ -0.56
NPC1-202ENST00000540608 ING5Q8WYH8 240 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 TRIM43Q96BQ3 446 aaPredicted RBP11.56□□□□□ -0.56
NPC1-202ENST00000540608 LRRC3BQ96PB8 259 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 TMEM43Q9BTV4 400 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 PRRG3Q9BZD7 231 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 CLCA2Q9UQC9 943 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 ALG5Q9Y673 324 aa11.56□□□□□ -0.56
NPC1-202ENST00000540608 NOTOA8MTQ0 251 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 KIAA0355O15063 1070 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 LALBAP00709 142 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 HLA-DPB1P04440 258 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 RPN2P04844 631 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 CCNYL3P0C7X3 344 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 PSMB5P28074 263 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 PRKAG1P54619 331 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 TAS2R38P59533 333 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 TAS2R41P59536 307 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 ACSM1Q08AH1 577 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 CAMK2BQ13554 666 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 P2RY14Q15391 338 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 C1orf53Q5VUE5 145 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 TMEM64Q6YI46 380 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 DNAJC5GQ8N7S2 189 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 TMIEQ8NEW7 156 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 NR4A3Q92570 626 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 RFKQ969G6 155 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 CHFRQ96EP1 664 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 OTUB1Q96FW1 271 aaPredicted RBP11.55□□□□□ -0.56
NPC1-202ENST00000540608 MENTQ9BUN1 341 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 SLC23A2Q9UGH3 650 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 MYO7AQ13402 2215 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 A0A1W2PPV9 198 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 FAM170BA6NMN3 283 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 WASHC1A8K0Z3 465 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 LYRM1O43325 122 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 LCMT2O60294 686 aaKnown RBP11.55□□□□□ -0.56
NPC1-202ENST00000540608 SOX18P35713 384 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 IL12RB1P42701 662 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 GZMKP49863 264 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 MAP4K2Q12851 820 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 ZNF155Q12901 538 aaPredicted RBP11.55□□□□□ -0.56
NPC1-202ENST00000540608 TNK1Q13470 666 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 IL18Q14116 193 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 DSG2Q14126 1118 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 DHCR24Q15392 516 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 PRAMEF8Q5VWM4 474 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 PRAMEF7Q5VXH5 474 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 MZT2AQ6P582 158 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 BHLHB9Q6PI77 547 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 WASH2PQ6VEQ5 465 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 GLCCI1Q86VQ1 547 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 SENP5Q96HI0 755 aaPredicted RBP11.55□□□□□ -0.56
NPC1-202ENST00000540608 KCNJ15Q99712 375 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 YIPF4Q9BSR8 244 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 HDHD5Q9BXW7 423 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 NIPAL2Q9H841 368 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 B3GAT2Q9NPZ5 323 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 TRPV5Q9NQA5 729 aa11.55□□□□□ -0.56
NPC1-202ENST00000540608 COL4A3Q01955 1670 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 A0A0G2JN53 185 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 FAM240BA0A1B0GVZ2 78 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 AGRPO00253 132 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 MAN2B1O00754 1011 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 CFL1P23528 166 aaKnown RBP11.54□□□□□ -0.56
NPC1-202ENST00000540608 NTSP30990 170 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 CDH11P55287 796 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 CLDN20P56880 219 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 TRAM2Q15035 370 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 SF3A2Q15428 464 aaKnown RBP11.54□□□□□ -0.56
NPC1-202ENST00000540608 AADACL4Q5VUY2 407 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 PLCZ1Q86YW0 608 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 MRPL43Q8N983 215 aaKnown RBP11.54□□□□□ -0.56
NPC1-202ENST00000540608 TMEM145Q8NBT3 493 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 SFXN5Q8TD22 340 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 WFIKKN2Q8TEU8 576 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 SMG7Q92540 1137 aaKnown RBP11.54□□□□□ -0.56
NPC1-202ENST00000540608 BBS4Q96RK4 519 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 DCLRE1CQ96SD1 692 aaKnown RBP11.54□□□□□ -0.56
NPC1-202ENST00000540608 ZNF649Q9BS31 505 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 MARVELD1Q9BSK0 173 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 TRAF4Q9BUZ4 470 aaPredicted RBP11.54□□□□□ -0.56
NPC1-202ENST00000540608 TMED9Q9BVK6 235 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 PRR14Q9BWN1 585 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 FAIM2Q9BWQ8 316 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 MALT1Q9UDY8 824 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 LIPT1Q9Y234 373 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 EXOGQ9Y2C4 368 aaKnown RBP11.54□□□□□ -0.56
NPC1-202ENST00000540608 LRIT2A6NDA9 550 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 SGK494L7N484 410 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 TNFRSF10AO00220 468 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 SYT5O00445 386 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 GABRPO00591 440 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 CHST10O43529 356 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms