RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 DPM1O60762 260 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 AKR7A3O95154 331 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 TFP02787 698 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 GABRA1P14867 456 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 MUC1P15941 1255 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 CPEP16870 476 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 AHCYP23526 432 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 MST1P26927 711 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 GIFP27352 417 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 TRHRP34981 398 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 TBX4P57082 545 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 ERVPABLB-1P60509 514 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 RPL38P63173 70 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 FOXK2Q01167 660 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 TAF10Q12962 218 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 ECH1Q13011 328 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 GPM6BQ13491 265 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 GK2Q14410 553 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 PTGES3Q15185 160 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 ZSWIM7Q19AV6 140 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 DHRS7BQ6IAN0 325 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 LILRA6Q6PI73 481 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 CBLL1Q75N03 491 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 SSX9Q7RTT3 188 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 MILR1Q7Z6M3 343 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 NAXDQ8IW45 347 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 WDSUB1Q8N9V3 476 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 PROKR2Q8NFJ6 384 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 OR52B6Q8NGF0 335 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 SVIPQ8NHG7 77 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 RXFP4Q8TDU9 374 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC2A13Q96QE2 648 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 INPP5KQ9BT40 448 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 ZYG11BQ9C0D3 744 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 QRSL1Q9H0R6 528 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC6A20Q9NP91 592 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 EXOSC3Q9NQT5 275 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 GKN1Q9NS71 199 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 OSER1Q9NX31 292 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 ASH2LQ9UBL3 628 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 SNX11Q9Y5W9 270 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 CHD5Q8TDI0 1954 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 LOC390937A0A1W2PQ73 354 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 A0A1W2PQH9 124 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 MEX3AA1L020 520 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 OR2W5A6NFC9 320 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC38A8A6NNN8 435 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 GABRR3A8MPY1 467 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 PRSS47A8MTI9 375 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 ARHGEF33A8MVX0 844 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 UBE2CO00762 179 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 CACNG3O60359 315 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 SEMA7AO75326 666 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 C1QCP02747 245 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 ANXA8P13928 327 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 NDUFB7P17568 137 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 ELK1P19419 428 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 S100A11P31949 105 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 RNF4P78317 190 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 IL10RBQ08334 325 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 PON3Q15166 354 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC25A52Q3SY17 297 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 RNF212Q495C1 297 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 SYTL3Q4VX76 610 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 CCDC157Q569K6 752 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 OTUD1Q5VV17 481 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 DOK6Q6PKX4 331 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 SEZ6L2Q6UXD5 910 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 USP30Q70CQ3 517 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 TMEM17Q86X19 198 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 SERPINA12Q8IW75 414 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 OXR1Q8N573 874 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 STAG3L4Q8TBR4 150 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 ZNF707Q96C28 371 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 TMEM41AQ96HV5 264 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 IL4I1Q96RQ9 567 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 NPY6RQ99463 290 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 ADAT1Q9BUB4 502 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 CACNG6Q9BXT2 260 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 RNF32Q9H0A6 362 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 FBXO44Q9H4M3 255 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 DHCR7Q9UBM7 475 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 SCML2Q9UQR0 700 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 YIPF1Q9Y548 306 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 ASB1Q9Y576 335 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 DMRT1Q9Y5R6 373 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 SPIN1Q9Y657 262 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 NUP214P35658 2090 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 C5orf52A6NGY3 159 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 OR51F1A6NGY5 319 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 H3BNC9 293 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 M0QYT0 321 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 EEF1E1O43324 174 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 SUSD5O60279 629 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 ADH1AP07327 375 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 ZDHHC11BP0C7U3 371 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 CBSLP0DN79 551 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 CNR2P34972 360 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 ADRA1AP35348 466 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 CBSP35520 551 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms