RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 BORAQ6PGQ7 559 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 RPS19BP1Q86WX3 136 aaKnown RBP14.3□□□□□ -0.12
DDB1-216ENST00000539739 SIRT6Q8N6T7 355 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 C17orf47Q8NEP4 570 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 SLC9A6Q92581 669 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 JADE3Q92613 823 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 TP53INP1Q96A56 240 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 LRRC58Q96CX6 371 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 GIMAP5Q96F15 307 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 ZNF354BQ96LW1 612 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 VSTM2LQ96N03 204 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 ITPAQ9BY32 194 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 GPATCH2Q9NW75 528 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 VAPAQ9P0L0 249 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 CORO2BQ9UQ03 480 aa14.3□□□□□ -0.12
DDB1-216ENST00000539739 ZFHX4Q86UP3 3567 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 CPA2P48052 419 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 NUDT2P50583 147 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 RUNDC3AQ59EK9 446 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 TCTN3Q6NUS6 607 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 CDC73Q6P1J9 531 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 C16orf87Q6PH81 154 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 ADAMTS15Q8TE58 950 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 ADIPOR1Q96A54 375 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 AURKBQ96GD4 344 aaPredicted RBP14.29□□□□□ -0.12
DDB1-216ENST00000539739 C16orf58Q96GQ5 468 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 LCORQ96JN0 433 aaPredicted RBP14.29□□□□□ -0.12
DDB1-216ENST00000539739 SH3GL1Q99961 368 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 YIPF4Q9BSR8 244 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 CDCP1Q9H5V8 836 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 EPS8L2Q9H6S3 715 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 RYDENQ9NUL5 291 aaKnown RBP14.29□□□□□ -0.12
DDB1-216ENST00000539739 SLC25A37Q9NYZ2 338 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 MYOTQ9UBF9 498 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 DTX4Q9Y2E6 619 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 PCDHGB3Q9Y5G1 929 aa14.29□□□□□ -0.12
DDB1-216ENST00000539739 PTPRQQ9UMZ3 2332 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 TRBV5-3A0A0A0MS03 114 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 DUXAA6NLW8 204 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 WWP2O00308 870 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 PFDN1O60925 122 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 UBOX5O94941 541 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 ALOX5P09917 674 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 HOXB9P17482 250 aaPredicted RBP14.28□□□□□ -0.12
DDB1-216ENST00000539739 DRD5P21918 477 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 NR0B1P51843 470 aaKnown RBP14.28□□□□□ -0.12
DDB1-216ENST00000539739 NRG3P56975 720 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 PSPHP78330 225 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 MEP1AQ16819 746 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 CRB2Q5IJ48 1285 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 AGAP7PQ5VUJ5 663 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 HACD2Q6Y1H2 254 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 ZNF554Q86TJ5 538 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 RNF130Q86XS8 419 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 SLC44A2Q8IWA5 706 aaPredicted RBP14.28□□□□□ -0.12
DDB1-216ENST00000539739 MSRB3Q8IXL7 192 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 TAGAPQ8N103 731 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 LGI4Q8N135 537 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 OR52N2Q8NGI0 321 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 PNPT1Q8TCS8 783 aaKnown RBP14.28□□□□□ -0.12
DDB1-216ENST00000539739 HSPBAP1Q96EW2 488 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 AGAP4Q96P64 663 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 BTBD9Q96Q07 612 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 HOPXQ9BPY8 73 aaPredicted RBP14.28□□□□□ -0.12
DDB1-216ENST00000539739 LMF2Q9BU23 707 aaKnown RBP14.28□□□□□ -0.12
DDB1-216ENST00000539739 THUMPD3Q9BV44 507 aaKnown RBP14.28□□□□□ -0.12
DDB1-216ENST00000539739 LIN28AQ9H9Z2 209 aaKnown RBP14.28□□□□□ -0.12
DDB1-216ENST00000539739 Q9N2J8 555 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 GIN1Q9NXP7 522 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 GPR83Q9NYM4 423 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 ABI3Q9P2A4 366 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 GPR55Q9Y2T6 319 aaPredicted RBP14.28□□□□□ -0.12
DDB1-216ENST00000539739 YARS2Q9Y2Z4 477 aaKnown RBP14.28□□□□□ -0.12
DDB1-216ENST00000539739 OR10H1Q9Y4A9 318 aa14.28□□□□□ -0.12
DDB1-216ENST00000539739 C15orf38-AP3S2A0A0A6YYH1 394 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 FRG2CA6NGY1 282 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 ACOX3O15254 700 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 NME6O75414 186 aaPredicted RBP14.27□□□□□ -0.12
DDB1-216ENST00000539739 DNAJB5O75953 348 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 UNC5CO95185 931 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 AGR2O95994 175 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 CRATP43155 626 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 CD97P48960 835 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 KHKP50053 298 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 MLF1P58340 268 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 PSG6Q00889 435 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 FADDQ13158 208 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 CAPRIN1Q14444 709 aaKnown RBP14.27□□□□□ -0.12
DDB1-216ENST00000539739 ABHD17BQ5VST6 288 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 FCRLBQ6BAA4 426 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 WDR53Q7Z5U6 358 aaPredicted RBP14.27□□□□□ -0.12
DDB1-216ENST00000539739 ARPINQ7Z6K5 226 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 PIAS4Q8N2W9 510 aaPredicted RBP14.27□□□□□ -0.12
DDB1-216ENST00000539739 ZNF441Q8N8Z8 693 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 SLC16A11Q8NCK7 471 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 SLC22A8Q8TCC7 542 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 GPR151Q8TDV0 419 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 PSMF1Q92530 271 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 HOXB13Q92826 284 aaPredicted RBP14.27□□□□□ -0.12
DDB1-216ENST00000539739 CNTNAP3BQ96NU0 1288 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms