RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 REM1O75628 298 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 GRK2P25098 689 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 FEN1P39748 380 aaKnown RBP13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 ARFIP1P53367 373 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 CLDN15P56746 228 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 B3GALT5-AS1P59052 145 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 RPS4XP62701 263 aaKnown RBP13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 CUL3Q13618 768 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 LTB4RQ15722 352 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 PRICKLE4Q2TBC4 344 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 CHRFAM7AQ494W8 412 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 ALKBH2Q6NS38 261 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 PPP4R4Q6NUP7 873 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 FAM180BQ6P0A1 224 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 ZNF611Q8N823 705 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 FNDC9Q8TBE3 224 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 STAG3L4Q8TBR4 150 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 AKAP1Q92667 903 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 CAVIN3Q969G5 261 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 TMCO6Q96DC7 493 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 UBXN10Q96LJ8 280 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 ATOH8Q96SQ7 321 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 GPR22Q99680 433 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 PSD3Q9NYI0 1048 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 TXNDC16Q9P2K2 825 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 CFL2Q9Y281 166 aa13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 YLPM1P49750 1951 aaKnown RBP13.17□□□□□ -0.3
CCDC144NL-202ENST00000539177 CCDC188H7C350 402 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 TLX2O43763 284 aaPredicted RBP13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 NME6O75414 186 aaPredicted RBP13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 CBX7O95931 251 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 KLK1P06870 262 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 CD8BP10966 210 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 PEPDP12955 493 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 ACVR1BP36896 505 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 CDKN1AP38936 164 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 SUCLG1P53597 346 aaKnown RBP13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 GPX6P59796 221 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 RAB10P61026 200 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 MRPS35P82673 323 aaKnown RBP13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 OCRLQ01968 901 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 DUSP2Q05923 314 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 MGAT2Q10469 447 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 PON3Q15166 354 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 TRMT12Q53H54 448 aaKnown RBP13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 RAET1LQ5VY80 246 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 LIPJQ5W064 366 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 SH2D5Q6ZV89 423 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 CMC1Q7Z7K0 106 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 ISCA2Q86U28 154 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 ZBED8Q8IZ13 594 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 CEP112Q8N8E3 955 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 OR4K17Q8NGC6 315 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 OR5M1Q8NGP8 315 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 WDR20Q8TBZ3 569 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 REPS1Q96D71 796 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 COL21A1Q96P44 957 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 ADOQ96SZ5 270 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 RBBP8Q99708 897 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 TRIM31Q9BZY9 425 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 RNF122Q9H9V4 155 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 TSC22D4Q9Y3Q8 395 aa13.16□□□□□ -0.3
CCDC144NL-202ENST00000539177 FRG2CA6NGY1 282 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 OR6C70A6NIJ9 312 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 H0YIV9 168 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 H3BML4 177 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 HAX1O00165 279 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 SCO2O43819 266 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 KERAO60938 352 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 ABCB7O75027 752 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 F12P00748 615 aaPredicted RBP13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 SSTR1P30872 391 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 ARL1P40616 181 aaPredicted RBP13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 MAP4K2Q12851 820 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 SLMAPQ14BN4 828 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 ZKSCAN8Q15776 578 aaPredicted RBP13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 BCL2A1Q16548 175 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 RAPH1Q70E73 1250 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 RAB3IL1Q8TBN0 382 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 DTNBP1Q96EV8 351 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 ZBED6CLQ96FA7 236 aaPredicted RBP13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 CDK15Q96Q40 435 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 MRPL1Q9BYD6 325 aaKnown RBP13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 ANKRA2Q9H9E1 313 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 ZNF639Q9UID6 485 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 CLEC4AQ9UMR7 237 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 RNF11Q9Y3C5 154 aa13.15□□□□□ -0.3
CCDC144NL-202ENST00000539177 GOLGA6L10A6NI86 522 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 A8MV72 311 aaPredicted RBP13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 TMCC2O75069 709 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 AQP8O94778 261 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 ATP1B1P05026 303 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 PCSK2P16519 638 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 HK1P19367 917 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 DRD5P21918 477 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 IL12BP29460 328 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 IDUAP35475 653 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 PPICP45877 212 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 EMDP50402 254 aa13.14□□□□□ -0.31
CCDC144NL-202ENST00000539177 CLDN20P56880 219 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms