RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 TTYH2Q9BSA4 534 aa10.57□□□□□ -0.72
RTN3-209ENST00000538995 MECRQ9BV79 373 aa10.57□□□□□ -0.72
RTN3-209ENST00000538995 TUBB1Q9H4B7 451 aa10.57□□□□□ -0.72
RTN3-209ENST00000538995 DDX18Q9NVP1 670 aaKnown RBP10.57□□□□□ -0.72
RTN3-209ENST00000538995 KLRF1Q9NZS2 232 aa10.57□□□□□ -0.72
RTN3-209ENST00000538995 RAB21Q9UL25 225 aa10.57□□□□□ -0.72
RTN3-209ENST00000538995 C19orf53Q9UNZ5 99 aaPredicted RBP10.57□□□□□ -0.72
RTN3-209ENST00000538995 EXO1Q9UQ84 846 aaKnown RBP10.57□□□□□ -0.72
RTN3-209ENST00000538995 RNF6Q9Y252 685 aa10.57□□□□□ -0.72
RTN3-209ENST00000538995 TRAF6Q9Y4K3 522 aa10.57□□□□□ -0.72
RTN3-209ENST00000538995 PTGDR2Q9Y5Y4 395 aa10.57□□□□□ -0.72
RTN3-209ENST00000538995 CACNA1CQ13936 2221 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 C15orf38-AP3S2A0A0A6YYH1 394 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 TTC36A6NLP5 189 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 PDPK1O15530 556 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 TSPAN2O60636 221 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 ICOSLGO75144 302 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 SPAG7O75391 227 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 REM1O75628 298 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 JUNP05412 331 aaKnown RBP10.56□□□□□ -0.72
RTN3-209ENST00000538995 CHRNGP07510 517 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 GLI4P10075 376 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 SDC1P18827 310 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 TACR1P25103 407 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 IL12BP29460 328 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 GCKP35557 465 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 PTGDSP41222 190 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 ETV4P43268 484 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 ASMTP46597 345 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 TRPC1P48995 793 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 PNLIPRP2P54317 469 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 CORO7P57737 925 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 RPL38P63173 70 aaKnown RBP10.56□□□□□ -0.72
RTN3-209ENST00000538995 CRYZQ08257 329 aaKnown RBP10.56□□□□□ -0.72
RTN3-209ENST00000538995 ZNF844Q08AG5 666 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 PDE7AQ13946 482 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 SF3B4Q15427 424 aaKnown RBP eCLIP10.56□□□□□ -0.72
RTN3-209ENST00000538995 UGT3A2Q3SY77 523 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 KRT71Q3SY84 523 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 CYP27C1Q4G0S4 372 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 XKR7Q5GH72 579 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 RIPPLY2Q5TAB7 128 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 RTL6Q6ICC9 239 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 TMEM107Q6UX40 140 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 ANGPTL8Q6UXH0 198 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 ULK2Q8IYT8 1036 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 OR6Y1Q8NGX8 325 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 ZFP28Q8NHY6 868 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 MTERF3Q96E29 417 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 PPP3R2Q96LZ3 170 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 GNRHR2Q96P88 292 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 PARD6BQ9BYG5 372 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 PRDM14Q9GZV8 571 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 ENKD1Q9H0I2 346 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 GLIPR2Q9H4G4 154 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 REEP4Q9H6H4 257 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 ANKRA2Q9H9E1 313 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 SSU72Q9NP77 194 aaKnown RBP10.56□□□□□ -0.72
RTN3-209ENST00000538995 TNFRSF10DQ9UBN6 386 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.56□□□□□ -0.72
RTN3-209ENST00000538995 FIS1Q9Y3D6 152 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 OR10H1Q9Y4A9 318 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 V9GYY5 206 aaPredicted RBP10.56□□□□□ -0.72
RTN3-209ENST00000538995 PKDREJQ9NTG1 2253 aa10.56□□□□□ -0.72
RTN3-209ENST00000538995 CREBBPQ92793 2442 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 AHRRA9YTQ3 701 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 ESPNB1AK53 854 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 TMEM114B3SHH9 223 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 TMEM233B4DJY2 109 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 C19orf84I3L1E1 186 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 UPK1AO00322 258 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 GNB5O14775 395 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 PIP5K1BO14986 540 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 RGS16O15492 202 aaPredicted RBP10.55□□□□□ -0.72
RTN3-209ENST00000538995 CBR3O75828 277 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 TRAPPC6AO75865 159 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 BPGMP07738 259 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 LINC00032P0C843 101 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 PRF1P14222 555 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 IGFBP2P18065 325 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 MAPK1P28482 360 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 RPL3P39023 403 aaKnown RBP10.55□□□□□ -0.72
RTN3-209ENST00000538995 FRKP42685 505 aaPredicted RBP10.55□□□□□ -0.72
RTN3-209ENST00000538995 PSG6Q00889 435 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 TFF3Q07654 80 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 ZNHIT3Q15649 155 aaPredicted RBP10.55□□□□□ -0.72
RTN3-209ENST00000538995 PRSS53Q2L4Q9 553 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 RFTN2Q52LD8 501 aaPredicted RBP10.55□□□□□ -0.72
RTN3-209ENST00000538995 SH2D4BQ5SQS7 431 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 VASNQ6EMK4 673 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 LRIG3Q6UXM1 1119 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 LARP4Q71RC2 724 aaKnown RBP eCLIP10.55□□□□□ -0.72
RTN3-209ENST00000538995 R3HCC1LQ7Z5L2 792 aaKnown RBP10.55□□□□□ -0.72
RTN3-209ENST00000538995 CROCCP2Q86T23 111 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 SLC44A2Q8IWA5 706 aaPredicted RBP10.55□□□□□ -0.72
RTN3-209ENST00000538995 DDIASQ8IXT1 998 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 PPCDCQ96CD2 204 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 ELP4Q96EB1 424 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 ZBED6CLQ96FA7 236 aaPredicted RBP10.55□□□□□ -0.72
RTN3-209ENST00000538995 EGLN2Q96KS0 407 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms