RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 ANKRD55Q3KP44 614 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 ATRAIDQ6UW56 229 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 MOB2Q70IA6 237 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 P4HA3Q7Z4N8 544 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 CATSPER3Q86XQ3 398 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 CENPSQ8N2Z9 138 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 TAF15Q92804 592 aaKnown RBP eCLIP4.73□□□□□ -1.65
SNHG1-205ENST00000537869 DLX4Q92988 240 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-205ENST00000537869 LHX4Q969G2 390 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 SLC25A36Q96CQ1 311 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 ZNF599Q96NL3 588 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 FICDQ9BVA6 458 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 RBM24Q9BX46 236 aaKnown RBP4.73□□□□□ -1.65
SNHG1-205ENST00000537869 CARD6Q9BX69 1037 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 RNF41Q9H4P4 317 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-205ENST00000537869 ELL3Q9HB65 397 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-205ENST00000537869 FAM114A2Q9NRY5 505 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 CGNQ9P2M7 1197 aaKnown RBP4.73□□□□□ -1.65
SNHG1-205ENST00000537869 CPQQ9Y646 472 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 PARD3Q8TEW0 1356 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 UHRF1BP1LA0JNW5 1464 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 PLEKHH2Q8IVE3 1493 aa4.73□□□□□ -1.65
SNHG1-205ENST00000537869 MYO5CQ9NQX4 1742 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 IGHV3OR16-10A0A075B7F0 116 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 A0A1B0GUL7 405 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 H0YL77 283 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 SEMA4FO95754 770 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 IGHG3P01860 377 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 FCGR3AP08637 254 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 PGFP49763 221 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 VCPP55072 806 aaKnown RBP4.72□□□□□ -1.65
SNHG1-205ENST00000537869 HAND2P61296 217 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 TRA2BP62995 288 aaKnown RBP4.72□□□□□ -1.65
SNHG1-205ENST00000537869 MRPS6P82932 125 aaKnown RBP4.72□□□□□ -1.65
SNHG1-205ENST00000537869 ACY1Q03154 408 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 RAPSNQ13702 412 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 CD226Q15762 336 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 KRTAP7-1Q8IUC3 87 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 ZNF491Q8N8L2 437 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 GIPC3Q8TF64 312 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 NTNG2Q96CW9 530 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 TSPAN18Q96SJ8 248 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 ATF6BQ99941 703 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 KAT8Q9H7Z6 458 aaKnown RBP4.72□□□□□ -1.65
SNHG1-205ENST00000537869 MBD2Q9UBB5 411 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 PURGQ9UJV8 347 aaKnown RBP4.72□□□□□ -1.65
SNHG1-205ENST00000537869 MFHAS1Q9Y4C4 1052 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 SHANK2Q9UPX8 1470 aa4.72□□□□□ -1.65
SNHG1-205ENST00000537869 TROQ12816 1431 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-205ENST00000537869 CAMSAP2Q08AD1 1489 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 ANKRD30AQ9BXX3 1397 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 NPIPA5A0A0B4J1W7 369 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 TTC26A0AVF1 554 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 NPIPA5E9PKD4 350 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 H3BTX0 84 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 SDC3O75056 442 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 PDE5AO76074 875 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 TOXO94900 526 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 IGSF6O95976 241 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 KRT6BP04259 564 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 ANXA4P09525 319 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-205ENST00000537869 SLC35G4P0C7Q5 338 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 MT3P25713 68 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 LMO2P25791 158 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 DPP4P27487 766 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 KIF5BP33176 963 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 SPRP35270 261 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-205ENST00000537869 PTGFRP43088 359 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 HTR5AP47898 357 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 KRT6CP48668 564 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 SLC7A2P52569 658 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 PPIAP62937 165 aaKnown RBP4.71□□□□□ -1.66
SNHG1-205ENST00000537869 GSTO1P78417 241 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 PAX8Q06710 450 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 EXOSC2Q13868 293 aaKnown RBP4.71□□□□□ -1.66
SNHG1-205ENST00000537869 C9orf66Q5T8R8 295 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 TAF3Q5VWG9 929 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 SULT1C3Q6IMI6 304 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 ZNF343Q6P1L6 599 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 EMBQ6PCB8 327 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 ZNF562Q6V9R5 426 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 ADAMTSL5Q6ZMM2 481 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 LPCAT2Q7L5N7 544 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 BHLHA9Q7RTU4 235 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 LHFPL4Q7Z7J7 247 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 VPS36Q86VN1 386 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 ZNF573Q86YE8 665 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 GCNT2Q8N0V5 402 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 ABHD12Q8N2K0 398 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 NFAM1Q8NET5 270 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-205ENST00000537869 OR52J3Q8NH60 311 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 DTNBP1Q96EV8 351 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 VGLL1Q99990 258 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 C19orf43Q9BQ61 176 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 TRIM51Q9BSJ1 452 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 JPT2Q9H910 190 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 PALMDQ9NP74 551 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 TRPV5Q9NQA5 729 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 TMOD2Q9NZR1 351 aa4.71□□□□□ -1.66
SNHG1-205ENST00000537869 GHRLQ9UBU3 117 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms