RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 WDR45Q9Y484 360 aa12.72□□□□□ -0.37
SMG6-203ENST00000536871 F5P12259 2224 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 CYP7B1O75881 506 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 ALOX5P09917 674 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 ALPPL2P10696 532 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 CD36P16671 472 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 POU1F1P28069 291 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 UGT2B10P36537 528 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 SMSP52788 366 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 CHRNEQ04844 493 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 ST3GAL4Q11206 333 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 NCF4Q15080 339 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 TIGD6Q17RP2 521 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 EXOSC6Q5RKV6 272 aaKnown RBP12.71□□□□□ -0.37
SMG6-203ENST00000536871 LACC1Q8IV20 430 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 FAM26EQ8N5C1 309 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 C7orf57Q8NEG2 295 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 FLCNQ8NFG4 579 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 KAT2AQ92830 837 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 COL26A1Q96A83 441 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 SLC35A4Q96G79 324 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 NELL2Q99435 816 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 SLC25A19Q9HC21 320 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 EQTNQ9NQ60 294 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 MRPS33Q9Y291 106 aaKnown RBP12.71□□□□□ -0.37
SMG6-203ENST00000536871 B3GNT3Q9Y2A9 372 aa12.71□□□□□ -0.37
SMG6-203ENST00000536871 DOCK9Q9BZ29 2069 aa12.71□□□□□ -0.38
SMG6-203ENST00000536871 LOC105369274A0A096LPK9 316 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 LOC102723532A0A0G2JNH3 316 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 LILRA5A6NI73 299 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 CYR61O00622 381 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 NARSO43776 548 aaKnown RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 STX11O75558 287 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 DBIP07108 87 aaKnown RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 INHBBP09529 407 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 S100A1P23297 94 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 SLC15A1P46059 708 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 RGS8P57771 180 aaPredicted RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 BNIP3Q12983 259 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 BIKQ13323 160 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 DECR1Q16698 335 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 TMEM31Q5JXX7 168 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 COL13A1Q5TAT6 717 aaPredicted RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 PLAG1Q6DJT9 500 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 TMEM53Q6P2H8 277 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 RBM45Q8IUH3 476 aaKnown RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 OR4N4Q8N0Y3 316 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 MORN4Q8NDC4 146 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 TCTN2Q96GX1 697 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 SHDQ96IW2 340 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 GAS2L1Q99501 681 aaPredicted RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 WDR12Q9GZL7 423 aaKnown RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 CHRNA10Q9GZZ6 450 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 SAP130Q9H0E3 1048 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 UBE2ZQ9H832 354 aaPredicted RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 LMAN1LQ9HAT1 526 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 HMG20AQ9NP66 347 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 AASSQ9UDR5 926 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 A3GALT2U3KPV4 340 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 PLXND1Q9Y4D7 1925 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 MYO10Q9HD67 2058 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 IGHV1OR15-9A0A0B4J2B8 117 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 FMO6PO60774 539 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 CSF2P04141 144 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 SLC35E2P0CK97 266 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 NME1P15531 152 aaKnown RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 CDH3P22223 829 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 STT3AP46977 705 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 GSSP48637 474 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 CLK1P49759 484 aaKnown RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 ENTPD1P49961 510 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 SIM1P81133 766 aaPredicted RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 RHAGQ02094 409 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 TSPAN31Q12999 210 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 SPCS2Q15005 226 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 FHL5Q5TD97 284 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 FAM111BQ6SJ93 734 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 FRRS1Q6ZNA5 592 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 Q6ZS52 159 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 RANBP3LQ86VV4 465 aaPredicted RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 CA13Q8N1Q1 262 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 ZNF619Q8N2I2 560 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 C19orf47Q8N9M1 422 aaKnown RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 B3GNT7Q8NFL0 401 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 PIGXQ8TBF5 258 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 ACOT11Q8WXI4 607 aaPredicted RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 ZNF350Q9GZX5 532 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 MAN2C1Q9NTJ4 1040 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 EPHA6Q9UF33 1036 aa12.7□□□□□ -0.38
SMG6-203ENST00000536871 ZNF443Q9Y2A4 671 aaPredicted RBP12.7□□□□□ -0.38
SMG6-203ENST00000536871 METTL12A8MUP2 240 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 UBXN7O94888 489 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 EPPINO95925 133 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 RPLP0P05388 317 aaKnown RBP12.69□□□□□ -0.38
SMG6-203ENST00000536871 CD38P28907 300 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 STAT5AP42229 794 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 C21orf59P57076 290 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 RACK1P63244 317 aaKnown RBP12.69□□□□□ -0.38
SMG6-203ENST00000536871 TFF2Q03403 129 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms