RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 LGSNQ5TDP6 509 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 PAMR1Q6UXH9 720 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 IFNEQ86WN2 208 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 PLCZ1Q86YW0 608 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CTAGE4Q8IX94 777 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CCDC116Q8IYX3 515 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SAMD14Q8IZD0 417 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ERP27Q96DN0 273 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 MBD6Q96DN6 1003 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 DTNBP1Q96EV8 351 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SFXN3Q9BWM7 321 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 DLGAP4Q9Y2H0 992 aa17.89■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ULK1O75385 1050 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 RCBTB2O95199 551 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 GOSR1O95249 250 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 RAF1P04049 648 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 IL3P08700 152 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 FOXF2Q12947 444 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 GLE1Q53GS7 698 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 UNC50Q53HI1 259 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ZNF678Q5SXM1 525 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SCIMPQ6UWF3 145 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ADGRE4PQ86SQ3 457 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 WNT2BQ93097 391 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SLC35A4Q96G79 324 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 BTBD9Q96Q07 612 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 UCN2Q96RP3 112 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ZNF382Q96SR6 550 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 RBM24Q9BX46 236 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ACBD3Q9H3P7 528 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ANKRA2Q9H9E1 313 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 GIMAP4Q9NUV9 329 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 TAS2R10Q9NYW0 307 aa17.88■□□□□ 0.45
TNFRSF1B-204ENST00000536782 MED12LQ86YW9 2145 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 EXOC1LA0A1B0GW35 172 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 GNG14A0A1W2PPG7 69 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CLCA1A8K7I4 914 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 PCDH7O60245 1069 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CT45A8P0DMV1 189 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CT45A9P0DMV2 189 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CHN1P15882 459 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ECHS1P30084 290 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 HMOX2P30519 316 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SRD5A2P31213 254 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 KRT20P35900 424 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 GFRA1P56159 465 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 PSPHP78330 225 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 EFR3AQ14156 821 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ERCC6LQ2NKX8 1250 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CT45A2Q5DJT8 189 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 AAGABQ6PD74 315 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 GPRIN3Q6ZVF9 776 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 GBP7Q8N8V2 638 aaPredicted RBP17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 OR9A2Q8NGT5 310 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 METTL6Q8TCB7 284 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 KAT2AQ92830 837 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 EXOSC8Q96B26 276 aaKnown RBP17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 INTS12Q96CB8 462 aaKnown RBP17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ADOQ96SZ5 270 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 YIPF4Q9BSR8 244 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 TMEM216Q9P0N5 145 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 WIF1Q9Y5W5 379 aa17.87■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CHMP24386 653 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 IL12BP29460 328 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CPA2P48052 419 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 STARP49675 285 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CORO7P57737 925 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 RAE1P78406 368 aaKnown RBP17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ACSM2AQ08AH3 577 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 FOXD4Q12950 439 aaPredicted RBP17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 KEAP1Q14145 624 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 HEPACAMQ14CZ8 416 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SPIN4Q56A73 249 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ACSM2BQ68CK6 577 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 TIFABQ6ZNK6 161 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 LARP4Q71RC2 724 aaKnown RBP eCLIP17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 LUZP2Q86TE4 346 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CEP112Q8N8E3 955 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 NOA1Q8NC60 698 aaKnown RBP17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 TMEM237Q96Q45 408 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ACPTQ9BZG2 426 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 PIGMQ9H3S5 423 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 GALNT8Q9NY28 637 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 DKKL1Q9UK85 242 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 FBXL2Q9UKC9 423 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 NFU1Q9UMS0 254 aa17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 MRPS18CQ9Y3D5 142 aaKnown RBP17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 NSD1Q96L73 2696 aaPredicted RBP17.86■□□□□ 0.45
TNFRSF1B-204ENST00000536782 DLX3O60479 287 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 TSPAN2O60636 221 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ATE1O95260 518 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 HOXB4P17483 251 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 IMPDH1P20839 514 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 LHX2P50458 406 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 PNLIPRP2P54317 469 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 EEF1A1P68104 462 aaKnown RBP17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ADAM8P78325 824 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 GAB1Q13480 694 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 DEFB113Q30KQ7 82 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 EEF1A1P5Q5VTE0 462 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms