RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 IFT88Q13099 833 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 EFR3AQ14156 821 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 C6orf163Q5TEZ5 329 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 IFNEQ86WN2 208 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 MYLK4Q86YV6 388 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 FADS6Q8N9I5 356 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 ZNF483Q8TF39 744 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 SLC44A1Q8WWI5 657 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 SREK1Q8WXA9 508 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 STARD4Q96DR4 205 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 COL21A1Q96P44 957 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 MRPL57Q9BQC6 102 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 ITPAQ9BY32 194 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 TSPYL1Q9H0U9 437 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 DPH5Q9H2P9 285 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 TAS2R10Q9NYW0 307 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 TRPS1Q9UHF7 1281 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 MCM8Q9UJA3 840 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 ZNF180Q9UJW8 692 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 ABCG2Q9UNQ0 655 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 WBP11Q9Y2W2 641 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 PLLPQ9Y342 182 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 ZNF175Q9Y473 711 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 WIF1Q9Y5W5 379 aa10.16□□□□□ -0.78
CLSTN3-206ENST00000535668 A0A087WV62 115 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 B4DXG7 233 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 PLOD2O00469 737 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 EMC8O43402 210 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 LRATO95237 230 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 PSMG1O95456 288 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 GBAP04062 536 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 SBK3P0C264 359 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 FPR1P21462 350 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 NT5EP21589 574 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 CRYGSP22914 178 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 LOXP28300 417 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 DSCR4P56555 118 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 NKX6-1P78426 367 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 PLCXD2Q0VAA5 305 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 GANABQ14697 944 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 TRADDQ15628 312 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 TRMT12Q53H54 448 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 FAM111BQ6SJ93 734 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 C20orf204Q6ZNR8 217 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 YRDCQ86U90 279 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 PLD6Q8N2A8 252 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 PTGR2Q8N8N7 351 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 OR4F6Q8NGB9 312 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 HOXB13Q92826 284 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 YIPF4Q9BSR8 244 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 FAIM2Q9BWQ8 316 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 GSX2Q9BZM3 304 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 ELOVL6Q9H5J4 265 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 RNF122Q9H9V4 155 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 HHATLQ9HCP6 504 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 GALNT9Q9HCQ5 603 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 SERHLQ9NQF3 203 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 VPS29Q9UBQ0 182 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 SNX6Q9UNH7 406 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 USF3Q68DE3 2245 aa10.15□□□□□ -0.78
CLSTN3-206ENST00000535668 DSCAMO60469 2012 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 A0A1B0GTL3 188 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 TTC36A6NLP5 189 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 EEF1E1-BLOC1S5C9J1V9 151 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 GNB5O14775 395 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 SIAH2O43255 324 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 EEF1E1O43324 174 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 FADS1O60427 444 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 PEPDP12955 493 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 PHBP35232 272 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 CD79BP40259 229 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 KIR2DL2P43627 348 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 SERPINB9P50453 376 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 CLDN15P56746 228 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 EEFSECP57772 596 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 DUSP2Q05923 314 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 CSTF3Q12996 717 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 TMEM44Q2T9K0 475 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 CYP27C1Q4G0S4 372 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 SIMC1Q8NDZ2 872 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 DOK4Q8TEW6 326 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 INTS12Q96CB8 462 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 ZNF764Q96H86 408 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 METTL2AQ96IZ6 378 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 CDK15Q96Q40 435 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 OR10A4Q9H209 315 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 MRPL46Q9H2W6 279 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 ZNF226Q9NYT6 803 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 KLRF1Q9NZS2 232 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 ZNF780BQ9Y6R6 833 aa10.14□□□□□ -0.79
CLSTN3-206ENST00000535668 NPIPB8E9PQR5 432 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 H0Y3Z8 333 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 CASKO14936 926 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 TGM6O95932 706 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 PDYNP01213 254 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 CTAGE8P0CG41 777 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 PPP3CBP16298 524 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 PCSK2P16519 638 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 HSD17B3P37058 310 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms