RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 NARFQ9UHQ1 456 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 RPH3AQ9Y2J0 694 aaPredicted RBP3.52□□□□□ -1.85
PRKDC-205ENST00000535375 MFSD2BA6NFX1 497 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 SLC2A10O95528 541 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 APRTP07741 180 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 WNT2P09544 360 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 ALPIP09923 528 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 H2AFZP0C0S5 128 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 CT45A10P0DMU9 189 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 AHCYP23526 432 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 CD86P42081 329 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 TRPC1P48995 793 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 HAND2P61296 217 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 ZNF33BQ06732 778 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 TSTA3Q13630 321 aaPredicted RBP3.51□□□□□ -1.85
PRKDC-205ENST00000535375 SMC1AQ14683 1233 aaKnown RBP3.51□□□□□ -1.85
PRKDC-205ENST00000535375 NKAIN2Q5VXU1 208 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 ZNF544Q6NX49 715 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 TSEN54Q7Z6J9 526 aaKnown RBP3.51□□□□□ -1.85
PRKDC-205ENST00000535375 HDDC3Q8N4P3 179 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 OR52E1Q8NGJ3 308 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 SLC13A3Q8WWT9 602 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 TMEM186Q96B77 213 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 DTD2Q96FN9 168 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 HSD3B7Q9H2F3 369 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 ODF2LQ9ULJ1 636 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 ENTPD4Q9Y227 616 aa3.51□□□□□ -1.85
PRKDC-205ENST00000535375 IGLV8-61A0A075B6I0 122 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 TLR4O00206 839 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 NUDT21O43809 227 aaKnown RBP3.5□□□□□ -1.85
PRKDC-205ENST00000535375 PRPSAP2O60256 369 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 ACTL6AO96019 429 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 ALPPP05187 535 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 ALPPL2P10696 532 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 ZNF18P17022 549 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 GAP43P17677 238 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 RPA1P27694 616 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 EPC2Q52LR7 807 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 NEK5Q6P3R8 708 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 ATRAIDQ6UW56 229 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 ZNF677Q86XU0 584 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 LHX4Q969G2 390 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 RUFY1Q96T51 708 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 NAP1L3Q99457 506 aaPredicted RBP3.5□□□□□ -1.85
PRKDC-205ENST00000535375 SDHCQ99643 169 aaPredicted RBP3.5□□□□□ -1.85
PRKDC-205ENST00000535375 CARD9Q9H257 536 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 NINJ2Q9NZG7 142 aa3.5□□□□□ -1.85
PRKDC-205ENST00000535375 APOBEC3BQ9UH17 382 aaKnown RBP3.5□□□□□ -1.85
PRKDC-205ENST00000535375 STAM2O75886 525 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 ECDO95905 644 aaPredicted RBP3.49□□□□□ -1.85
PRKDC-205ENST00000535375 PSMB1P20618 241 aaKnown RBP3.49□□□□□ -1.85
PRKDC-205ENST00000535375 IL2RGP31785 369 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 WNT4P56705 351 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 ZNF85Q03923 595 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 EIF4EBP2Q13542 120 aaPredicted RBP3.49□□□□□ -1.85
PRKDC-205ENST00000535375 GAMTQ14353 236 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 CLPPQ16740 277 aaPredicted RBP3.49□□□□□ -1.85
PRKDC-205ENST00000535375 MCOLN2Q8IZK6 566 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 C14orf178Q8N769 122 aaPredicted RBP3.49□□□□□ -1.85
PRKDC-205ENST00000535375 SETD7Q8WTS6 366 aaKnown RBP3.49□□□□□ -1.85
PRKDC-205ENST00000535375 MRPL38Q96DV4 380 aaKnown RBP3.49□□□□□ -1.85
PRKDC-205ENST00000535375 ZNF560Q96MR9 790 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 SPATA13Q96N96 652 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 ACCSQ96QU6 501 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 APOOQ9BUR5 198 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 HCAR1Q9BXC0 346 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 TRPV6Q9H1D0 765 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 ABCG8Q9H221 673 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 SYTL2Q9HCH5 934 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 RPS6KB2Q9UBS0 482 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 PIN4Q9Y237 131 aaKnown RBP3.49□□□□□ -1.85
PRKDC-205ENST00000535375 FLVCR1Q9Y5Y0 555 aa3.49□□□□□ -1.85
PRKDC-205ENST00000535375 RNF103-CHMP3A0A140T963 221 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 SLC17A2O00624 439 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 ARPC1BO15143 372 aaKnown RBP3.48□□□□□ -1.85
PRKDC-205ENST00000535375 SERF1AO75920 110 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 CXCL10P02778 98 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 HOXB7P09629 217 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 CPN1P15169 458 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 UGT1A6P19224 532 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 IGFBP5P24593 272 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 OR1D4P47884 311 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 ALDH3B2P48448 385 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 CNN1P51911 297 aaKnown RBP3.48□□□□□ -1.85
PRKDC-205ENST00000535375 RAG2P55895 527 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 KRTAP10-8P60410 259 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 CCZ1BP86790 482 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 CCZ1P86791 482 aaPredicted RBP3.48□□□□□ -1.85
PRKDC-205ENST00000535375 GFPT1Q06210 699 aaPredicted RBP3.48□□□□□ -1.85
PRKDC-205ENST00000535375 PDK1Q15118 436 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 TOR1AIP1Q5JTV8 583 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 DLEU7Q6UYE1 221 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 TOM1L2Q6ZVM7 507 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 MIER3Q7Z3K6 550 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 RANBP3LQ86VV4 465 aaPredicted RBP3.48□□□□□ -1.85
PRKDC-205ENST00000535375 SLC22A16Q86VW1 577 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 ELMOD2Q8IZ81 293 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 MLKLQ8NB16 471 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 CNNM3Q8NE01 707 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 EXOC6Q8TAG9 804 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms