RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MAP2K3P46734 347 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 CTC1Q2NKJ3 1217 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 TCEAL8Q8IYN2 117 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 BORCS6Q96GS4 357 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 AP1S3Q96PC3 154 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 RPH3AQ9Y2J0 694 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 A0A0J9YY10 115 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 LILRB3O75022 631 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 JRKO75564 520 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 CD79AP11912 226 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 CERS1P27544 350 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 VEGFBP49765 207 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 RNASE10Q5GAN6 216 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 AADACL4Q5VUY2 407 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 LYSMD4Q5XG99 296 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 OR5AK2Q8NH90 309 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 EIF5A2Q9GZV4 153 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 KCMF1Q9P0J7 381 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 H3BQ06 376 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 ZNF888P0CJ79 500 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 PGGT1BP53609 377 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 USF2Q15853 346 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 OR5H2Q8NGV7 314 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 MAN2C1Q9NTJ4 1040 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 PCTPQ9UKL6 214 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 A0A0G2JMP0 313 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 KIAA0513O60268 411 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 DNAJB5O75953 348 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 C7P10643 843 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 LAMP1P11279 417 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 PROZP22891 400 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 SLC6A8P48029 635 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 TDGQ13569 410 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 TBRG1Q3YBR2 411 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 RBM12BQ8IXT5 1001 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 ZFP41Q8N8Y5 198 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 CLEC1AQ8NC01 280 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 OR4M2Q8NGB6 313 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 TAS2R3Q9NYW6 316 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 MGAT4CQ9UBM8 478 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 A0A0A6YYH2 397 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 A6NJ64 397 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 A8MV72 311 aaPredicted RBP17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 PTGESO14684 152 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 ADAP00813 363 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 MTFR2Q6P444 385 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 MOCOSQ96EN8 888 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 METTL2AQ96IZ6 378 aaKnown RBP17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 PTRH2Q9Y3E5 179 aaKnown RBP17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 COL1A1P02452 1464 aaPredicted RBP17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 E7ESA3 106 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 H3BML4 177 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 ADAMTS4O75173 837 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 PPP1R3DO95685 299 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 SLC2A5P22732 501 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 HOXA11P31270 313 aaPredicted RBP17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 PRPS1P60891 318 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 HACD2Q6Y1H2 254 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 GLYATL2Q8WU03 294 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 SYT3Q9BQG1 590 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 RAB9BQ9NP90 201 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 M0QZQ0 153 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 CTHP32929 405 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 SOX3P41225 446 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 CDKN2CP42773 168 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 MTNR1AP48039 350 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 TMEM201Q5SNT2 666 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 STEAP4Q687X5 459 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 ENPP6Q6UWR7 440 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 MRPL21Q7Z2W9 205 aaKnown RBP17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 NPWQ8N729 165 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 CDRT4Q8N9R6 151 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 OR4K5Q8NGD3 323 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 FUBP1Q96AE4 644 aaKnown RBP17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 RGCCQ9H4X1 137 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 RANBP3Q9H6Z4 567 aaPredicted RBP17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 ARSAP15289 507 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 TAP2Q03519 686 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 MRPL10Q7Z7H8 261 aaKnown RBP17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 BEST3Q8N1M1 668 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 FRS2Q8WU20 508 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 C7orf43Q8WVR3 580 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 HDHD5Q9BXW7 423 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 C14orf119Q9NWQ9 140 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 GDE1Q9NZC3 331 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 KLHL13Q9P2N7 655 aa17.22■□□□□ 0.35
SFSWAP-203ENST00000535236 EFCAB7A8K855 629 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 ARHGEF15O94989 841 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 PRSS56P0CW18 603 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 GGT1P19440 569 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 FGL1Q08830 312 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 SNTB2Q13425 540 aaKnown RBP17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 EIF2B1Q14232 305 aaKnown RBP17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 CLLU1OSQ5K130 101 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 GPR157Q5UAW9 335 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 HAGHLQ6PII5 290 aaPredicted RBP17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 SLC16A9Q7RTY1 509 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 ADH6P28332 368 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 GSG1LQ6UXU4 331 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms