RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 SDR39U1Q9NRG7 319 aaPredicted RBP12.89□□□□□ -0.35
VPS11-205ENST00000534551 TUBA8Q9NY65 449 aaPredicted RBP12.89□□□□□ -0.35
VPS11-205ENST00000534551 TAS2R9Q9NYW1 312 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 ESPL1Q14674 2120 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 RNF103-CHMP3A0A140T963 221 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 ASPDHA6ND91 283 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 FAM166BA8MTA8 275 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 RNASET2O00584 256 aaKnown RBP12.88□□□□□ -0.35
VPS11-205ENST00000534551 EMC8O43402 210 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 PPM1BO75688 479 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 BCAS2O75934 225 aaPredicted RBP12.88□□□□□ -0.35
VPS11-205ENST00000534551 TGDSO95455 350 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 IGKV1D-16P01601 117 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 DRD5P21918 477 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 GNLYP22749 145 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 S100A3P33764 101 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 NRG3P56975 720 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 DUSP5Q16690 384 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 SPDYE7PQ495Y7 208 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 GTDC1Q4AE62 458 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 ZNF324BQ6AW86 544 aaPredicted RBP12.88□□□□□ -0.35
VPS11-205ENST00000534551 ZAR1Q86SH2 424 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 MIER2Q8N344 545 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 FBXW8Q8N3Y1 598 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 SLC15A4Q8N697 577 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 BCORP1Q8N888 145 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 GOLM1Q8NBJ4 401 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 SLC16A11Q8NCK7 471 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 OR2M7Q8NG81 312 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 OR5D16Q8NGK9 328 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 PSMA8Q8TAA3 256 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 SPPL2AQ8TCT8 520 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 PAQR8Q8TEZ7 354 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 FAR1Q8WVX9 515 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 NR4A3Q92570 626 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 SLC9A6Q92581 669 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 RMND5BQ96G75 393 aaPredicted RBP12.88□□□□□ -0.35
VPS11-205ENST00000534551 BARD1Q99728 777 aaKnown RBP12.88□□□□□ -0.35
VPS11-205ENST00000534551 SLX1AQ9BQ83 275 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 CCDC28BQ9BUN5 200 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 CCDC134Q9H6E4 229 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 NEUROD4Q9HD90 331 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 SACM1LQ9NTJ5 587 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 OLAHQ9NV23 265 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 NTMQ9P121 344 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 OR10H1Q9Y4A9 318 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 PCDHGB6Q9Y5F9 930 aa12.88□□□□□ -0.35
VPS11-205ENST00000534551 MED12Q93074 2177 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 C2orf72A6NCS6 295 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 LRRC3CA6NJW4 275 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 NR5A2O00482 541 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 TO15178 435 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 ACOX3O15254 700 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 TSPAN2O60636 221 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 ICOSLGO75144 302 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 REM1O75628 298 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 SLC22A3O75751 556 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 HMGN2P05204 90 aaKnown RBP12.87□□□□□ -0.35
VPS11-205ENST00000534551 GSNP06396 782 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 PGRP06401 933 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 ZNF24P17028 368 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 DDX5P17844 614 aaKnown RBP12.87□□□□□ -0.35
VPS11-205ENST00000534551 GABRA3P34903 492 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 PTGDSP41222 190 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 CCT3P49368 545 aaKnown RBP12.87□□□□□ -0.35
VPS11-205ENST00000534551 KCNK10P57789 538 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 DCAF7P61962 342 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 HSF1Q00613 529 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 GTF3C1Q12789 2109 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 GSTA3Q16772 222 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 EXOSC6Q5RKV6 272 aaKnown RBP12.87□□□□□ -0.35
VPS11-205ENST00000534551 CCNJQ5T5M9 372 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 OLIG3Q7RTU3 272 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 SFXN5Q8TD22 340 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 DIO2Q92813 273 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 HOXB13Q92826 284 aaPredicted RBP12.87□□□□□ -0.35
VPS11-205ENST00000534551 CDS1Q92903 461 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 VPS33AQ96AX1 596 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 HSPBAP1Q96EW2 488 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 ZNF317Q96PQ6 595 aaPredicted RBP12.87□□□□□ -0.35
VPS11-205ENST00000534551 OR52E6Q96RD3 313 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 ADOQ96SZ5 270 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 ZBTB18Q99592 522 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 ZNF385DQ9H6B1 395 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 GALNT9Q9HCQ5 603 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 SLC6A13Q9NSD5 602 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 GPATCH2Q9NW75 528 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 FAM120CQ9NX05 1096 aaKnown RBP12.87□□□□□ -0.35
VPS11-205ENST00000534551 ZIM2Q9NZV7 527 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 LIPGQ9Y5X9 500 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 KCNE3Q9Y6H6 103 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 TENM4Q6N022 2769 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 HIVEP3Q5T1R4 2406 aa12.87□□□□□ -0.35
VPS11-205ENST00000534551 FASNP49327 2511 aaKnown RBP12.86□□□□□ -0.35
VPS11-205ENST00000534551 NPIPA5E9PKD4 350 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 J3QKU1 62 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 HS6ST1O60243 411 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 P04436 131 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 CELA3AP09093 270 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 IFI6P09912 130 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms