RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 UCK2Q9BZX2 261 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 STMN4Q9H169 189 aaPredicted RBP12.84□□□□□ -0.35
SF3B2-215ENST00000534307 METTL7AQ9H8H3 244 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 GALNT9Q9HCQ5 603 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 PFDN4Q9NQP4 134 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 GIMAP4Q9NUV9 329 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 MID2Q9UJV3 735 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 WBP11Q9Y2W2 641 aaKnown RBP12.84□□□□□ -0.35
SF3B2-215ENST00000534307 A0A087WV62 115 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 A0A0G2JNJ9 132 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 AZIN1O14977 448 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 SNPHO15079 494 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 TSPAN2O60636 221 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 DIAPH2O60879 1101 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 ICOSLGO75144 302 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 CRCPO75575 148 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 GABRA1P14867 456 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 ALDH3A1P30838 453 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 MASP1P48740 699 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 ERCC6LQ2NKX8 1250 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 UGT3A2Q3SY77 523 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 KANK2Q63ZY3 851 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 SLC30A6Q6NXT4 461 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 EMBQ6PCB8 327 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 SPNS3Q6ZMD2 512 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 Q6ZSR9 355 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 CAVIN3Q969G5 261 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 ZNF764Q96H86 408 aaPredicted RBP12.83□□□□□ -0.36
SF3B2-215ENST00000534307 EGLN2Q96KS0 407 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 OSBPL11Q9BXB4 747 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 PRDM14Q9GZV8 571 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 EXO5Q9H790 373 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 FOLH1BQ9HBA9 442 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 SLC17A7Q9P2U7 560 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 Q9UFV3 132 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 DNAJC15Q9Y5T4 150 aa12.83□□□□□ -0.36
SF3B2-215ENST00000534307 INTS1Q8N201 2190 aaKnown RBP12.82□□□□□ -0.36
SF3B2-215ENST00000534307 NKX2-6A6NCS4 301 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 PRAMEF25A6NGN4 478 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 FAM90A27PA6NNH2 459 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 B4DXG7 233 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 PLOD2O00469 737 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 ABCB7O75027 752 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 ERN1O75460 977 aaKnown RBP12.82□□□□□ -0.36
SF3B2-215ENST00000534307 SLITRK5O94991 958 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 SLU7O95391 586 aaKnown RBP12.82□□□□□ -0.36
SF3B2-215ENST00000534307 JUNP05412 331 aaKnown RBP12.82□□□□□ -0.36
SF3B2-215ENST00000534307 CHRNGP07510 517 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 FGF4P08620 206 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 IFI6P09912 130 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 MSX1P28360 303 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 ARRB2P32121 409 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 MC3RP41968 323 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 PSPHP78330 225 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 PSG6Q00889 435 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 ACSF3Q4G176 576 aaPredicted RBP12.82□□□□□ -0.36
SF3B2-215ENST00000534307 EIPR1Q53HC9 387 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 RIPPLY2Q5TAB7 128 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 VASNQ6EMK4 673 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 ANGPTL8Q6UXH0 198 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 LIX1LQ8IVB5 337 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 OR2L13Q8N349 312 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 LIX1Q8N485 282 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 WDSUB1Q8N9V3 476 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 OR1J4Q8NGS1 313 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 CDC26Q8NHZ8 85 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 C14orf79Q96F83 325 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 AMDHD1Q96NU7 426 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 COL21A1Q96P44 957 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 FAM111AQ96PZ2 611 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 BBS4Q96RK4 519 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 TIMP4Q99727 224 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 MECRQ9BV79 373 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 TMEM109Q9BVC6 243 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 ROPN1BQ9BZX4 212 aaPredicted RBP12.82□□□□□ -0.36
SF3B2-215ENST00000534307 GLIPR2Q9H4G4 154 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 ROPN1Q9HAT0 212 aaPredicted RBP12.82□□□□□ -0.36
SF3B2-215ENST00000534307 LRTM1Q9HBL6 345 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 MIEF1Q9NQG6 463 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 C1orf109Q9NX04 203 aa12.82□□□□□ -0.36
SF3B2-215ENST00000534307 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.82□□□□□ -0.36
SF3B2-215ENST00000534307 C19orf53Q9UNZ5 99 aaPredicted RBP12.82□□□□□ -0.36
SF3B2-215ENST00000534307 V9GYY5 206 aaPredicted RBP12.82□□□□□ -0.36
SF3B2-215ENST00000534307 C15orf38-AP3S2A0A0A6YYH1 394 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 C2orf72A6NCS6 295 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 KDM4EB2RXH2 506 aaPredicted RBP12.81□□□□□ -0.36
SF3B2-215ENST00000534307 TMEM233B4DJY2 109 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 UPK1AO00322 258 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 SLC28A1O00337 649 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 GNB5O14775 395 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 LSM1O15116 133 aaKnown RBP12.81□□□□□ -0.36
SF3B2-215ENST00000534307 NPHS1O60500 1241 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 SEC22BO75396 215 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 TRAPPC6AO75865 159 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 NEFHP12036 1026 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 CREB1P16220 341 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 SDC1P18827 310 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 NCBP2P52298 156 aaKnown RBP eCLIP12.81□□□□□ -0.36
SF3B2-215ENST00000534307 GAS1P54826 345 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 ARL13AQ5H913 290 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms