RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ARSGQ96EG1 525 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 C16orf58Q96GQ5 468 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 WDYHV1Q96HA8 205 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 APOPT1Q96IL0 206 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 FCRL1Q96LA6 429 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 PPP1R36Q96LQ0 422 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 AMDHD1Q96NU7 426 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 UGT2B28Q9BY64 529 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 TP63Q9H3D4 680 aaPredicted RBP8.78□□□□□ -1
SSBP3-215ENST00000533946 EXO5Q9H790 373 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 SIRT5Q9NXA8 310 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 CNIH4Q9P003 139 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 ZNF780BQ9Y6R6 833 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 C15orf38-AP3S2A0A0A6YYH1 394 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 ANKRD33BA6NCL7 494 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 GOLGA6L10A6NI86 522 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 ACOT7O00154 380 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 LSM1O15116 133 aaKnown RBP8.77□□□□□ -1.01
SSBP3-215ENST00000533946 DYRK3O43781 588 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 TYROBPO43914 113 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 SUSD5O60279 629 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 TRIM13O60858 407 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 CDH16O75309 829 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 ERN1O75460 977 aaKnown RBP8.77□□□□□ -1.01
SSBP3-215ENST00000533946 REM1O75628 298 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 PSMG1O95456 288 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 HPNP05981 417 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 UROSP10746 265 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 DRD2P14416 443 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 POU3F2P20265 443 aaPredicted RBP8.77□□□□□ -1.01
SSBP3-215ENST00000533946 DRD5P21918 477 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 ETV4P43268 484 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 CLDN15P56746 228 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 B3GALT5-AS1P59052 145 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 RPL38P63173 70 aaKnown RBP8.77□□□□□ -1.01
SSBP3-215ENST00000533946 ZNF763Q0D2J5 394 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 PLCXD2Q0VAA5 305 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 FOXF2Q12947 444 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 TOMM20Q15388 145 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 CCDC153Q494R4 210 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 GALNTL6Q49A17 601 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 SPIN4Q56A73 249 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 CFAP157Q5JU67 520 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 C10orf62Q5T681 223 aaPredicted RBP8.77□□□□□ -1.01
SSBP3-215ENST00000533946 C1orf185Q5T7R7 199 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 TIGD3Q6B0B8 471 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 SLC34A3Q8N130 599 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 CLEC4FQ8N1N0 589 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 OR7A2PQ8NGA2 310 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 CA5BP1Q8WTZ4 195 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 RNF138Q8WVD3 245 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 RND1Q92730 232 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 ELP4Q96EB1 424 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 LURAP1Q96LR2 239 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 ZNF597Q96LX8 424 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 BTBD9Q96Q07 612 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 BBS4Q96RK4 519 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 TREX2Q9BQ50 279 aaPredicted RBP8.77□□□□□ -1.01
SSBP3-215ENST00000533946 YIPF4Q9BSR8 244 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 C1orf50Q9BV19 199 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 FAIM2Q9BWQ8 316 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 ENKD1Q9H0I2 346 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 LIME1Q9H400 295 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 LRTM1Q9HBL6 345 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 ACKR4Q9NPB9 350 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 MYNNQ9NPC7 610 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 EQTNQ9NQ60 294 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.77□□□□□ -1.01
SSBP3-215ENST00000533946 TRAF6Q9Y4K3 522 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 KCNE3Q9Y6H6 103 aa8.77□□□□□ -1.01
SSBP3-215ENST00000533946 PRR14LQ5THK1 2151 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 PRAMEF25A6NGN4 478 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 FRG2CA6NGY1 282 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 SNPHO15079 494 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 TO15178 435 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 OIP5O43482 229 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 SCO2O43819 266 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 ZNF500O60304 480 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-215ENST00000533946 FADS1O60427 444 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 ZIC3O60481 467 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 PLOD3O60568 738 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 HCN1O60741 890 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 PEX11AO75192 247 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 SKAP2O75563 359 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-215ENST00000533946 SLU7O95391 586 aaKnown RBP8.76□□□□□ -1.01
SSBP3-215ENST00000533946 ACP2P11117 423 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 BCKDHAP12694 445 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 COX6B1P14854 86 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 AGAP20933 346 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 RFX3P48380 749 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 MASP1P48740 699 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 ZNF136P52737 540 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 SRYQ05066 204 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 ZNF155Q12901 538 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-215ENST00000533946 HSPB3Q12988 150 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 STX5Q13190 355 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 PTGR1Q14914 329 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 IMPG1Q17R60 797 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 ACSF3Q4G176 576 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms