RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CT45A2Q5DJT8 189 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 NHSL2Q5HYW2 709 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 LIPMQ5VYY2 423 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 TRIM46Q7Z4K8 759 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 LACC1Q8IV20 430 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 C4orf33Q8N1A6 199 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 OR14L1PQ8NHC6 308 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 FAM76AQ8TAV0 307 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 NTNG2Q96CW9 530 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 DTNBP1Q96EV8 351 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 LRRC46Q96FV0 321 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 VSTM2LQ96N03 204 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 BTBD9Q96Q07 612 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 UGT2B28Q9BY64 529 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 PRDM14Q9GZV8 571 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 IQCGQ9H095 443 aaKnown RBP14.09□□□□□ -0.15
CPSF1-211ENST00000533492 C12orf65Q9H3J6 166 aaKnown RBP14.09□□□□□ -0.15
CPSF1-211ENST00000533492 FOLH1BQ9HBA9 442 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 SERHLQ9NQF3 203 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 WBP11Q9Y2W2 641 aaKnown RBP14.09□□□□□ -0.15
CPSF1-211ENST00000533492 OR10H1Q9Y4A9 318 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 POLR3HQ9Y535 204 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-211ENST00000533492 COQ9O75208 318 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 SEC22BO75396 215 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 RSL1D1O76021 490 aaKnown RBP14.08□□□□□ -0.16
CPSF1-211ENST00000533492 ACTL6AO96019 429 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 JUNP05412 331 aaKnown RBP14.08□□□□□ -0.16
CPSF1-211ENST00000533492 BMP5P22003 454 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 NTSP30990 170 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 TIMP3P35625 211 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 MRPS22P82650 360 aaKnown RBP14.08□□□□□ -0.16
CPSF1-211ENST00000533492 RCAN2Q14206 197 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 FAM71E1Q6IPT2 247 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 NOXRED1Q6NXP6 359 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 SEM1Q6ZVN7 128 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 LARP4Q71RC2 724 aaKnown RBP eCLIP14.08□□□□□ -0.16
CPSF1-211ENST00000533492 SLC44A2Q8IWA5 706 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-211ENST00000533492 TNIP2Q8NFZ5 429 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 OR7G2Q8NG99 324 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 SLC35A4Q96G79 324 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 WDYHV1Q96HA8 205 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 TRIB1Q96RU8 372 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 MYNNQ9NPC7 610 aa14.08□□□□□ -0.16
CPSF1-211ENST00000533492 POLQO75417 2590 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 MYO1GB0I1T2 1018 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 SLC28A1O00337 649 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 RGS14O43566 566 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 TSPAN2O60636 221 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 SLITRK5O94991 958 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 ZWINTO95229 277 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 UQCRC1P31930 480 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 CEACAM8P31997 349 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-211ENST00000533492 PNLIPRP2P54317 469 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 WNT3P56703 355 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 SLC18A2Q05940 514 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 ZNF155Q12901 538 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-211ENST00000533492 SH2D4BQ5SQS7 431 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 NSUN5P2Q63ZY6 315 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 CLEC6AQ6EIG7 209 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 ENPP6Q6UWR7 440 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 ARSKQ6UWY0 536 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 NPSR1Q6W5P4 371 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 CDH24Q86UP0 819 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 TMEM200AQ86VY9 491 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 PLCZ1Q86YW0 608 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 C10orf107Q8IVU9 208 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 WDSUB1Q8N9V3 476 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 METTL2AQ96IZ6 378 aaKnown RBP14.07□□□□□ -0.16
CPSF1-211ENST00000533492 L2HGDHQ9H9P8 463 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 TAS2R7Q9NYW3 318 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 FIS1Q9Y3D6 152 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 WIF1Q9Y5W5 379 aa14.07□□□□□ -0.16
CPSF1-211ENST00000533492 A0A087WV62 115 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 CD8B2A6NJW9 211 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 KDM4EB2RXH2 506 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-211ENST00000533492 AZIN1O14977 448 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 TRIM13O60858 407 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 CHEK2O96017 543 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 CYP4B1P13584 511 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 PEX19P40855 299 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 MC3RP41968 323 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 DLX5P56178 289 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 PRSS53Q2L4Q9 553 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 DCST1Q5T197 706 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 TMEM107Q6UX40 140 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 IKBIPQ70UQ0 350 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 TRIM42Q8IWZ5 723 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 NAXEQ8NCW5 288 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 OR4N2Q8NGD1 307 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.06□□□□□ -0.16
CPSF1-211ENST00000533492 EFHD2Q96C19 240 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-211ENST00000533492 OR2B2Q9GZK3 357 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 GLIPR2Q9H4G4 154 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 CALHM2Q9HA72 323 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 TNFRSF12AQ9NP84 129 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 DDX18Q9NVP1 670 aaKnown RBP14.06□□□□□ -0.16
CPSF1-211ENST00000533492 C1orf109Q9NX04 203 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 TAS2R10Q9NYW0 307 aa14.06□□□□□ -0.16
CPSF1-211ENST00000533492 ZNF629Q9UEG4 869 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-211ENST00000533492 C19orf53Q9UNZ5 99 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms