RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 OR6Y1Q8NGX8 325 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 AGR3Q8TD06 166 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 TMCO6Q96DC7 493 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 SLC35A4Q96G79 324 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 OSBPL11Q9BXB4 747 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 KLRF1Q9NZS2 232 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 C19orf53Q9UNZ5 99 aaPredicted RBP27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 CACNA1CQ13936 2221 aa27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 PHF3Q92576 2039 aaKnown RBP27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 GNB5O14775 395 aa27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 ABCB7O75027 752 aa27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 WDR1O75083 606 aa27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 ICOSLGO75144 302 aa27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 HPNP05981 417 aa27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 ELAVL4P26378 380 aaKnown RBP27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 PTGDSP41222 190 aa27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 CDK9P50750 372 aaKnown RBP27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 NUP107P57740 925 aa27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 SLC44A2Q8IWA5 706 aaPredicted RBP27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 OR1J4Q8NGS1 313 aa27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 ASB5Q8WWX0 329 aa27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 ZNF764Q96H86 408 aaPredicted RBP27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 TSSK3Q96PN8 268 aa27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 RNF6Q9Y252 685 aa27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 FAM215AQ9Y5M1 114 aa27.69■■■□□ 2.02
SSSCA1-207ENST00000533115 PRAMEF25A6NGN4 478 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 TSPAN2O60636 221 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 KRT20P35900 424 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 ZNF155Q12901 538 aaPredicted RBP27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 RTL6Q6ICC9 239 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 ANGPTL8Q6UXH0 198 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 B3GNT6Q6ZMB0 384 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 OR2L13Q8N349 312 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 ELP4Q96EB1 424 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 ADOQ96SZ5 270 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 REEP4Q9H6H4 257 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 RUBCNLQ9H714 662 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 GALNT9Q9HCQ5 603 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 SSU72Q9NP77 194 aaKnown RBP27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 DDX18Q9NVP1 670 aaKnown RBP27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 BAIAP2L1Q9UHR4 511 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 ZDHHC2Q9UIJ5 367 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 PCDHGB3Q9Y5G1 929 aa27.68■■■□□ 2.02
SSSCA1-207ENST00000533115 FREM3P0C091 2139 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 C19orf84I3L1E1 186 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 UPK1AO00322 258 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 SNPHO15079 494 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 PDPK1O15530 556 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 AKAP10O43572 662 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 TBX19O60806 448 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 PTPN6P29350 595 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 CHRNB4P30926 498 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 ANKRD26P1Q6NSI1 321 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 EXOC3L1Q86VI1 746 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 NUDCD3Q8IVD9 361 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 CLHC1Q8NHS4 586 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 TTYH2Q9BSA4 534 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 ALKBH4Q9NXW9 302 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 OR10H1Q9Y4A9 318 aa27.67■■■□□ 2.02
SSSCA1-207ENST00000533115 C15orf38-AP3S2A0A0A6YYH1 394 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 C2orf72A6NCS6 295 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 PSMG1O95456 288 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 HOXD4P09016 255 aaPredicted RBP27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 IFI6P09912 130 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 GABRA1P14867 456 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 IL12BP29460 328 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 SERPINB4P48594 390 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 PSG6Q00889 435 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 EFR3AQ14156 821 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 TOMM20Q15388 145 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 XKR7Q5GH72 579 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 CEP85LQ5SZL2 805 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 C1orf185Q5T7R7 199 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 LARP4Q71RC2 724 aaKnown RBP eCLIP27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 OR4N2Q8NGD1 307 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 PPCDCQ96CD2 204 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 PPP3R2Q96LZ3 170 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 ZIM3Q96PE6 472 aa27.66■■■□□ 2.02
SSSCA1-207ENST00000533115 GLI4P10075 376 aa27.65■■■□□ 2.02
SSSCA1-207ENST00000533115 BCKDHAP12694 445 aa27.65■■■□□ 2.02
SSSCA1-207ENST00000533115 COX6B1P14854 86 aa27.65■■■□□ 2.02
SSSCA1-207ENST00000533115 ASMTP46597 345 aa27.65■■■□□ 2.02
SSSCA1-207ENST00000533115 PNLIPRP2P54317 469 aa27.65■■■□□ 2.02
SSSCA1-207ENST00000533115 PDE7AQ13946 482 aa27.65■■■□□ 2.02
SSSCA1-207ENST00000533115 ZNF385BQ569K4 471 aa27.65■■■□□ 2.02
SSSCA1-207ENST00000533115 ZNF551Q7Z340 670 aaPredicted RBP27.65■■■□□ 2.02
SSSCA1-207ENST00000533115 PPP1R14CQ8TAE6 165 aa27.65■■■□□ 2.02
SSSCA1-207ENST00000533115 CIDECQ96AQ7 238 aaPredicted RBP27.65■■■□□ 2.02
SSSCA1-207ENST00000533115 PKNOX2Q96KN3 472 aa27.65■■■□□ 2.02
SSSCA1-207ENST00000533115 CENPHQ9H3R5 247 aa27.65■■■□□ 2.02
SSSCA1-207ENST00000533115 GIMAP2Q9UG22 337 aa27.65■■■□□ 2.02
SSSCA1-207ENST00000533115 PEX11AO75192 247 aa27.64■■■□□ 2.02
SSSCA1-207ENST00000533115 PRF1P14222 555 aa27.64■■■□□ 2.02
SSSCA1-207ENST00000533115 HSPB3Q12988 150 aa27.64■■■□□ 2.02
SSSCA1-207ENST00000533115 EIPR1Q53HC9 387 aa27.64■■■□□ 2.02
SSSCA1-207ENST00000533115 CCDC71Q8IV32 467 aaPredicted RBP27.64■■■□□ 2.02
SSSCA1-207ENST00000533115 OR10Q1Q8NGQ4 319 aa27.64■■■□□ 2.02
SSSCA1-207ENST00000533115 LILRB4Q8NHJ6 448 aa27.64■■■□□ 2.02
SSSCA1-207ENST00000533115 EFHD2Q96C19 240 aaPredicted RBP27.64■■■□□ 2.02
SSSCA1-207ENST00000533115 SH3BP4Q9P0V3 963 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms