RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 WIF1Q9Y5W5 379 aa13.8□□□□□ -0.2
BRPF3-210ENST00000532538 OR6C70A6NIJ9 312 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 PLOD2O00469 737 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 ABCB7O75027 752 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 OR4F21O95013 312 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 HMOX2P30519 316 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 PTGDSP41222 190 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 SERPINB9P50453 376 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 HMGCS1Q01581 520 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 GUCY2DQ02846 1103 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 CKAP4Q07065 602 aaKnown RBP13.79□□□□□ -0.2
BRPF3-210ENST00000532538 MGAT2Q10469 447 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 EFR3AQ14156 821 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 GGTA1PQ4G0N0 100 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 SHEQ5VZ18 495 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 PPP4R4Q6NUP7 873 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 TMEM81Q6P7N7 255 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 LARP4Q71RC2 724 aaKnown RBP eCLIP13.79□□□□□ -0.2
BRPF3-210ENST00000532538 WDSUB1Q8N9V3 476 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 CDC26Q8NHZ8 85 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 MRPL57Q9BQC6 102 aaKnown RBP13.79□□□□□ -0.2
BRPF3-210ENST00000532538 ACSS3Q9H6R3 686 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 ANKRA2Q9H9E1 313 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 DLL4Q9NR61 685 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 NINJ2Q9NZG7 142 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 C6orf203Q9P0P8 240 aaPredicted RBP13.79□□□□□ -0.2
BRPF3-210ENST00000532538 PPP4R1LQ9P1A2 415 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 VPS29Q9UBQ0 182 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 FBXL2Q9UKC9 423 aa13.79□□□□□ -0.2
BRPF3-210ENST00000532538 SCO2O43819 266 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 SMPD2O60906 423 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 SUPT7LO94864 414 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 KRT6AP02538 564 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 KRT6BP04259 564 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 CD53P19397 219 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 TAC1P20366 129 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 DPP4P27487 766 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 KRT6CP48668 564 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 EMDP50402 254 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 TRA2BP62995 288 aaKnown RBP13.78□□□□□ -0.2
BRPF3-210ENST00000532538 SIRPAP78324 504 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 MRPS22P82650 360 aaKnown RBP13.78□□□□□ -0.2
BRPF3-210ENST00000532538 DUSP2Q05923 314 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 BTKQ06187 659 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 GALNT1Q10472 559 aaPredicted RBP13.78□□□□□ -0.2
BRPF3-210ENST00000532538 LETMD1Q6P1Q0 360 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 SLC44A2Q8IWA5 706 aaPredicted RBP13.78□□□□□ -0.2
BRPF3-210ENST00000532538 MEIOBQ8N635 442 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 CDYL2Q8N8U2 506 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 OR9A2Q8NGT5 310 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 UHMK1Q8TAS1 419 aaKnown RBP13.78□□□□□ -0.2
BRPF3-210ENST00000532538 SMPDL3BQ92485 455 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 EFHD2Q96C19 240 aaPredicted RBP13.78□□□□□ -0.2
BRPF3-210ENST00000532538 CNRIP1Q96F85 164 aaPredicted RBP13.78□□□□□ -0.2
BRPF3-210ENST00000532538 PIK3IP1Q96FE7 263 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 MED18Q9BUE0 208 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 MRPL46Q9H2W6 279 aaKnown RBP13.78□□□□□ -0.2
BRPF3-210ENST00000532538 UBTD1Q9HAC8 227 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 KLHL28Q9NXS3 571 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 ZNF226Q9NYT6 803 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 TRPS1Q9UHF7 1281 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 ZNF639Q9UID6 485 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 NFU1Q9UMS0 254 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 DLGAP4Q9Y2H0 992 aa13.78□□□□□ -0.2
BRPF3-210ENST00000532538 SLC22A20A6NK97 555 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 A8MXE2 369 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 TRIM49D1C9J1S8 452 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 PPP6CO00743 305 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 SEC14L5O43304 696 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 PCDH7O60245 1069 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 NME6O75414 186 aaPredicted RBP13.77□□□□□ -0.21
BRPF3-210ENST00000532538 IL3P08700 152 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 RPS17P08708 135 aaKnown RBP13.77□□□□□ -0.21
BRPF3-210ENST00000532538 COL6A2P12110 1019 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 GRK2P25098 689 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 HOXC12P31275 282 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 LHX2P50458 406 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 GFRA1P56159 465 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 CORO7P57737 925 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 CLCQ05315 142 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 FAM27E3Q08E93 113 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 ZNF155Q12901 538 aaPredicted RBP13.77□□□□□ -0.21
BRPF3-210ENST00000532538 STX5Q13190 355 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 RAET1LQ5VY80 246 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 OR2A2Q6IF42 318 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 SAMD14Q8IZD0 417 aaPredicted RBP13.77□□□□□ -0.21
BRPF3-210ENST00000532538 ZNF483Q8TF39 744 aaPredicted RBP13.77□□□□□ -0.21
BRPF3-210ENST00000532538 CTHRC1Q96CG8 243 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 MTBPQ96DY7 904 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 PGM2Q96G03 612 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 ZC3HAV1LQ96H79 300 aaKnown RBP13.77□□□□□ -0.21
BRPF3-210ENST00000532538 BBS4Q96RK4 519 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 PAFAH2Q99487 392 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 LRRC1Q9BTT6 524 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 CLCF1Q9UBD9 225 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 HEY2Q9UBP5 337 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 MCM8Q9UJA3 840 aa13.77□□□□□ -0.21
BRPF3-210ENST00000532538 GPR55Q9Y2T6 319 aaPredicted RBP13.77□□□□□ -0.21
BRPF3-210ENST00000532538 ARID1AO14497 2285 aa13.76□□□□□ -0.21
BRPF3-210ENST00000532538 A0A1B0GTL3 188 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms