RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 LRRC8CQ8TDW0 803 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 OR5P2Q8WZ92 322 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 TMBIM1Q969X1 311 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 FAM120BQ96EK7 910 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 SLC35A4Q96G79 324 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 NODALQ96S42 347 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 DUSP26Q9BV47 211 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 TTTY12Q9BZ98 90 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 CXorf36Q9H7Y0 433 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 ZDHHC11Q9H8X9 412 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 DDX18Q9NVP1 670 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 SEC14L3Q9UDX4 400 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 NPIPA1Q9UND3 350 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 ZNF835Q9Y2P0 537 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 USH1CQ9Y6N9 552 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 DOPEY2Q9Y3R5 2298 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 OR6C70A6NIJ9 312 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 CAPN14A8MX76 684 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 ZNHIT1O43257 154 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 EMC8O43402 210 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 COQ9O75208 318 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 NKX2-2O95096 273 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 C6orf47O95873 294 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 STSP08842 583 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 RFPL3SP0C7P2 107 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 ZNF24P17028 368 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 ZFP36L2P47974 494 aaKnown RBP12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 HBA1P69905 142 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 TMEM198Q66K66 360 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 OR4F3Q6IEY1 312 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 BNC2Q6ZN30 1099 aaPredicted RBP12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 FAM47EQ6ZV65 393 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 SPATA19Q7Z5L4 167 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 SLC44A2Q8IWA5 706 aaPredicted RBP12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 TMEM251Q8N6I4 163 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 NUP43Q8NFH3 380 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 ZFP28Q8NHY6 868 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 TESCQ96BS2 214 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 C16orf58Q96GQ5 468 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 MAGED4Q96JG8 741 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 MAGEB18Q96M61 343 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 DPY30Q9C005 99 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 IL1RL2Q9HB29 575 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 ATAD3AQ9NVI7 634 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 MAPRE3Q9UPY8 281 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 HRH3Q9Y5N1 445 aa12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.78□□□□□ -0.36
TSPAN4-220ENST00000532375 COL12A1Q99715 3063 aa12.77□□□□□ -0.36
TSPAN4-220ENST00000532375 GXYLT2A0PJZ3 443 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 WIPF3A6NGB9 483 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 B4DXG7 233 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 TP53I11O14683 189 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 ZIC2O95409 532 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 IGKV1D-16P01601 117 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 RNF224P0DH78 156 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 ACP2P11117 423 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 GPC1P35052 558 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 TMED10P49755 219 aaKnown RBP12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 PNLIPRP2P54317 469 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 PPIAP62937 165 aaKnown RBP12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 HSF1Q00613 529 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 PLCXD2Q0VAA5 305 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 LSM12Q3MHD2 195 aaKnown RBP12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 CYP27C1Q4G0S4 372 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 MFSD12Q6NUT3 480 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 GFRALQ6UXV0 394 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 GK5Q6ZS86 529 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 CLECL1Q8IZS7 167 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 SLC16A11Q8NCK7 471 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 CEP70Q8NHQ1 597 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 PRR7Q8TB68 274 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 FAM110BQ8TC76 370 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 DIO2Q92813 273 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 COL21A1Q96P44 957 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 PRPF18Q99633 342 aaKnown RBP12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 ZFP64Q9NPA5 681 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 GPATCH2Q9NW75 528 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 ERRFI1Q9UJM3 462 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 OSGIN2Q9Y236 505 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 PCNX1Q96RV3 2341 aa12.77□□□□□ -0.37
TSPAN4-220ENST00000532375 MED12Q93074 2177 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 LRRK2Q5S007 2527 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 RNASET2O00584 256 aaKnown RBP12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 REM1O75628 298 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 TGDSO95455 350 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 IGHG3P01860 377 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 CELA3AP09093 270 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 DDX5P17844 614 aaKnown RBP12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 MAGEA5P43359 124 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 MAN2A2P49641 1150 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 IDH3AP50213 366 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 GAS1P54826 345 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 PSPHP78330 225 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 ZNF155Q12901 538 aaPredicted RBP12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 UBAP2LQ14157 1087 aaKnown RBP12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 PGS1Q32NB8 556 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 SPANXN4Q5MJ08 99 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 TBCELQ5QJ74 424 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 ZCCHC12Q6PEW1 402 aa12.76□□□□□ -0.37
TSPAN4-220ENST00000532375 Q6ZPB1 254 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms